Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim11Q99PQ2 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.69□□□□□ -1.18
Trim11Q99PQ2 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.69□□□□□ -1.18
Trim11Q99PQ2 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim11Q99PQ2 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim11Q99PQ2 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.69□□□□□ -1.18
Trim11Q99PQ2 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm11903-201ENSMUST00000118958 727 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm12447-201ENSMUST00000119110 470 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm13484-201ENSMUST00000120738 412 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm15381-201ENSMUST00000121501 1156 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm14613-201ENSMUST00000122239 752 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm22636-201ENSMUST00000158142 275 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm16113-201ENSMUST00000159629 372 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm7654-201ENSMUST00000186738 683 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm43689-201ENSMUST00000195951 427 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm2975-201ENSMUST00000209710 820 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm45269-201ENSMUST00000210359 282 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm19154-201ENSMUST00000223330 940 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 AC133598.2-201ENSMUST00000224302 624 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 CT030182.3-201ENSMUST00000225986 582 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm43229-201ENSMUST00000201812 1850 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim11Q99PQ2 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Gm22781-201ENSMUST00000104083 137 ntBASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Gm15110-201ENSMUST00000117545 881 ntBASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Gm14677-201ENSMUST00000117866 486 ntBASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Gm15310-201ENSMUST00000117891 372 ntBASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Gm14122-201ENSMUST00000122076 973 ntBASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Gm25640-201ENSMUST00000175378 125 ntBASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Gm27317-201ENSMUST00000183533 95 ntBASIC7.67□□□□□ -1.18
Trim11Q99PQ2 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim11Q99PQ2 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms