Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm12388-201ENSMUST00000119112 1887 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm17137-201ENSMUST00000164106 4371 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm12598-201ENSMUST00000117333 830 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm3102-201ENSMUST00000164236 489 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm17064-201ENSMUST00000167690 452 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm17198-201ENSMUST00000171792 1154 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm9597-201ENSMUST00000171913 602 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm18199-201ENSMUST00000173820 835 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm18191-201ENSMUST00000174624 824 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm26923-201ENSMUST00000182615 996 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm8151-201ENSMUST00000184817 871 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm38131-201ENSMUST00000192449 430 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm37493-201ENSMUST00000193167 433 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm20926-201ENSMUST00000194457 696 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm18843-201ENSMUST00000194982 719 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm42886-201ENSMUST00000199214 466 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm42581-201ENSMUST00000201774 966 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm26063-201ENSMUST00000083378 107 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm37924-201ENSMUST00000195470 3647 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm18878-201ENSMUST00000223071 1443 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
RtcbQ99LF4 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.09□□□□□ -1.11
RtcbQ99LF4 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RtcbQ99LF4 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8.09□□□□□ -1.12
RtcbQ99LF4 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
RtcbQ99LF4 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
RtcbQ99LF4 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
RtcbQ99LF4 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RtcbQ99LF4 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
RtcbQ99LF4 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm15189-201ENSMUST00000121164 1966 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm38142-201ENSMUST00000194093 3555 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
RtcbQ99LF4 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm7146-201ENSMUST00000116079 739 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm22952-201ENSMUST00000116720 120 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm22103-201ENSMUST00000116733 121 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm26475-201ENSMUST00000116769 121 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm23620-201ENSMUST00000116812 121 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm25042-201ENSMUST00000116856 121 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Mir466j-201ENSMUST00000116876 122 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm25540-201ENSMUST00000116880 121 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm16458-201ENSMUST00000121428 502 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm7931-201ENSMUST00000121537 271 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm15488-201ENSMUST00000121682 670 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC8.08□□□□□ -1.12
RtcbQ99LF4 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RtcbQ99LF4 Gm25363-201ENSMUST00000158850 245 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Ear-ps10-201ENSMUST00000161871 460 ntBASIC8.08□□□□□ -1.12
RtcbQ99LF4 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms