Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm12804-201ENSMUST00000121030 999 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm11891-201ENSMUST00000121241 619 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm11385-201ENSMUST00000121513 570 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm25057-201ENSMUST00000157366 88 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm25989-201ENSMUST00000158761 133 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm3102-201ENSMUST00000164236 489 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm17064-201ENSMUST00000167690 452 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Adgrg4-206ENSMUST00000168724 531 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm18560-201ENSMUST00000173463 1123 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm5871-201ENSMUST00000176461 718 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm25244-201ENSMUST00000178089 132 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm27186-201ENSMUST00000184223 307 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm7634-201ENSMUST00000185778 553 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm18447-201ENSMUST00000187501 307 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm20954-201ENSMUST00000189078 644 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm38068-201ENSMUST00000192546 540 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm42720-201ENSMUST00000196813 300 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm8454-201ENSMUST00000196980 811 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm18861-201ENSMUST00000202509 1186 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 AC147628.1-201ENSMUST00000228193 688 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 CT030684.2-201ENSMUST00000228946 826 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Desi2-202ENSMUST00000069568 1193 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm24917-201ENSMUST00000083935 104 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Olfr654-201ENSMUST00000098173 1155 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Clrn1Q8K445 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.11□□□□□ -1.43
Clrn1Q8K445 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clrn1Q8K445 Mir678-201ENSMUST00000102114 84 ntBASIC6.1□□□□□ -1.43
Clrn1Q8K445 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms