Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm17137-202ENSMUST00000165729 957 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm15257-201ENSMUST00000177680 883 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm15252-201ENSMUST00000177750 883 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm15256-201ENSMUST00000177793 883 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm15260-201ENSMUST00000179402 883 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm7952-201ENSMUST00000180540 984 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Mir6362-201ENSMUST00000184329 107 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm28934-201ENSMUST00000186491 346 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm8282-201ENSMUST00000187559 483 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm43222-201ENSMUST00000199013 603 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm7181-201ENSMUST00000202197 434 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm44053-201ENSMUST00000203364 929 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm18689-201ENSMUST00000203969 902 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm24029-201ENSMUST00000083928 143 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm25345-201ENSMUST00000104505 133 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm22361-201ENSMUST00000158435 176 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm24767-201ENSMUST00000158509 95 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm23386-201ENSMUST00000158585 144 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm24741-201ENSMUST00000158857 106 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm21399-201ENSMUST00000180210 597 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm29124-201ENSMUST00000186576 452 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm44494-201ENSMUST00000196760 129 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm18467-201ENSMUST00000208805 434 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 AC132260.2-201ENSMUST00000224482 344 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm9519-201ENSMUST00000206108 1337 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Prpf39Q8K2Z2 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Prpf39Q8K2Z2 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Prpf39Q8K2Z2 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Prpf39Q8K2Z2 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms