Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm25433-201ENSMUST00000158283 286 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Mir3097-201ENSMUST00000175356 67 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm37203-201ENSMUST00000191618 385 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm37444-201ENSMUST00000193605 439 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm35013-201ENSMUST00000197218 832 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm45724-201ENSMUST00000213031 420 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm18591-201ENSMUST00000220568 763 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm4845-201ENSMUST00000179202 562 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm27024-201ENSMUST00000182561 755 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm28080-201ENSMUST00000188552 722 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm21524-201ENSMUST00000190499 696 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm21715-201ENSMUST00000191056 694 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm37265-201ENSMUST00000191698 885 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm37609-201ENSMUST00000191778 678 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm2614-201ENSMUST00000223227 403 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Nup88Q8CEC0 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm15078-201ENSMUST00000118371 782 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm14294-201ENSMUST00000119749 751 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm12396-201ENSMUST00000121600 306 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm5430-201ENSMUST00000182525 915 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm43743-202ENSMUST00000198353 491 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm44221-201ENSMUST00000203552 388 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm44694-201ENSMUST00000205317 1298 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm8863-201ENSMUST00000216630 926 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Mir298-201ENSMUST00000083476 82 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Nup88Q8CEC0 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms