Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm11212-201ENSMUST00000118337 618 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm13156-201ENSMUST00000118348 321 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm7927-201ENSMUST00000118818 880 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm15493-201ENSMUST00000119461 528 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm16074-201ENSMUST00000119524 444 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm12262-201ENSMUST00000119915 305 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm21990-201ENSMUST00000124692 383 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm4845-201ENSMUST00000179202 562 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm28885-201ENSMUST00000185615 563 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm18407-201ENSMUST00000192126 790 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm43743-202ENSMUST00000198353 491 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm18689-201ENSMUST00000203969 902 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm4032-201ENSMUST00000210886 487 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Gm24032-201ENSMUST00000083932 159 ntBASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ccdc38Q8CDN8 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Pramel-201ENSMUST00000118979 1383 ntBASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Ccdc38Q8CDN8 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm22952-201ENSMUST00000116720 120 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm15332-201ENSMUST00000118386 357 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Zfp389-201ENSMUST00000118425 675 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm14531-201ENSMUST00000120845 285 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm12438-201ENSMUST00000122034 336 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Mir1945-201ENSMUST00000157919 78 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm21999-201ENSMUST00000165985 387 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm27004-201ENSMUST00000183300 727 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm43467-201ENSMUST00000197441 437 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm44053-201ENSMUST00000203364 929 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm44108-201ENSMUST00000203525 422 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm7413-201ENSMUST00000219498 462 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc38Q8CDN8 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.63□□□□□ -1.35
Ccdc38Q8CDN8 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms