Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm22724-201ENSMUST00000158091 127 ntBASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm25660-201ENSMUST00000158470 104 ntBASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm16531-201ENSMUST00000180658 967 ntBASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm37609-201ENSMUST00000191778 678 ntBASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm43743-202ENSMUST00000198353 491 ntBASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm7042-201ENSMUST00000223027 384 ntBASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Mir143-201ENSMUST00000083511 63 ntBASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc60Q8C4J0 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm15011-201ENSMUST00000117724 1480 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm43891-201ENSMUST00000205132 3112 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm24048-201ENSMUST00000102411 106 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm22499-201ENSMUST00000104501 135 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm14938-201ENSMUST00000119482 943 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm12244-201ENSMUST00000119500 291 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm11533-201ENSMUST00000120287 477 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm14212-201ENSMUST00000122023 826 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm15335-201ENSMUST00000122442 411 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm23279-201ENSMUST00000157912 97 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm18199-201ENSMUST00000173820 835 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm22650-201ENSMUST00000175138 105 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm22569-201ENSMUST00000175545 124 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm37716-201ENSMUST00000193553 947 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm42646-201ENSMUST00000202233 914 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm31861-201ENSMUST00000204563 672 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 AC154595.2-201ENSMUST00000225067 310 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Mir375-201ENSMUST00000083682 64 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Gm37082-201ENSMUST00000192629 1927 ntBASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ccdc60Q8C4J0 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Gm16423-201ENSMUST00000120078 947 ntBASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Gm15801-201ENSMUST00000120920 522 ntBASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Gm12322-201ENSMUST00000121605 389 ntBASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Gm23408-201ENSMUST00000158523 265 ntBASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Gm8783-201ENSMUST00000159764 522 ntBASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Gm3242-201ENSMUST00000171273 485 ntBASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Gm6472-201ENSMUST00000178147 651 ntBASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.37□□□□□ -1.23
Ccdc60Q8C4J0 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms