Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm13473-201ENSMUST00000119289 367 ntBASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm2959-201ENSMUST00000169844 621 ntBASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC8.24□□□□□ -1.09
Usp47Q8BY87 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm28640-201ENSMUST00000190918 550 ntBASIC8.24□□□□□ -1.09
Usp47Q8BY87 Ighv5-21-201ENSMUST00000191935 295 ntBASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm18591-201ENSMUST00000220568 763 ntBASIC8.24□□□□□ -1.09
Usp47Q8BY87 AC158525.1-201ENSMUST00000223806 576 ntBASIC8.24□□□□□ -1.09
Usp47Q8BY87 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm44209-201ENSMUST00000204556 4153 ntBASIC8.24□□□□□ -1.09
Usp47Q8BY87 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm43745-201ENSMUST00000198085 1883 ntBASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp47Q8BY87 AC164567.3-201ENSMUST00000217743 2869 ntBASIC8.24□□□□□ -1.09
Usp47Q8BY87 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp47Q8BY87 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp47Q8BY87 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm43502-201ENSMUST00000200263 2596 ntBASIC8.24□□□□□ -1.09
Usp47Q8BY87 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm4973-201ENSMUST00000206925 1334 ntBASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm13890-201ENSMUST00000117578 390 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm11908-201ENSMUST00000117755 347 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm6808-201ENSMUST00000162341 807 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm27193-201ENSMUST00000184217 586 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm6520-201ENSMUST00000200636 410 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm44108-201ENSMUST00000203525 422 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm5735-201ENSMUST00000207053 167 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm18996-201ENSMUST00000214851 755 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm6477-201ENSMUST00000217098 764 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm37773-201ENSMUST00000194141 2120 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 Gm43483-201ENSMUST00000196724 2860 ntBASIC8.23□□□□□ -1.09
Usp47Q8BY87 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Usp47Q8BY87 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm12768-201ENSMUST00000120055 759 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm24103-201ENSMUST00000174930 77 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 CT030175.1-201ENSMUST00000220822 408 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 AC164618.3-201ENSMUST00000224863 681 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 AC125405.1-201ENSMUST00000226406 589 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 n-R5s65-201ENSMUST00000082614 117 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm14367-201ENSMUST00000119214 1497 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm22592-201ENSMUST00000104242 131 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm11833-201ENSMUST00000118393 853 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm7309-201ENSMUST00000121670 581 ntBASIC8.22□□□□□ -1.09
Usp47Q8BY87 Gm6081-201ENSMUST00000134472 489 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms