Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm45078-201ENSMUST00000205343 546 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm33242-201ENSMUST00000212130 1057 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 AC153646.1-201ENSMUST00000223229 1279 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 AC134335.1-201ENSMUST00000227626 329 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 AC136376.1-201ENSMUST00000228496 950 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 CT009600.1-201ENSMUST00000228771 337 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm23737-201ENSMUST00000082547 159 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm37186-201ENSMUST00000195629 2861 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm7155-201ENSMUST00000121143 1671 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm22032-201ENSMUST00000116946 116 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm17711-201ENSMUST00000172028 237 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm26915-201ENSMUST00000183080 748 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm28973-201ENSMUST00000189310 613 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm18444-201ENSMUST00000191239 629 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm43215-201ENSMUST00000199108 252 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 Gm44849-201ENSMUST00000207595 484 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp40Q8BWR4 AC164629.1-201ENSMUST00000220250 1113 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 AC134254.2-201ENSMUST00000221262 170 ntBASIC8.35□□□□□ -1.07
Usp40Q8BWR4 AC154556.1-201ENSMUST00000224587 885 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms