Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm37511-201ENSMUST00000192901 294 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC3.9□□□□□ -1.78
PrkdcP97313 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PrkdcP97313 Gm7665-201ENSMUST00000076710 297 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
PrkdcP97313 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PrkdcP97313 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PrkdcP97313 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
PrkdcP97313 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC3.9□□□□□ -1.78
PrkdcP97313 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC3.9□□□□□ -1.78
PrkdcP97313 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
PrkdcP97313 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
PrkdcP97313 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PrkdcP97313 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
PrkdcP97313 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PrkdcP97313 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
PrkdcP97313 Gm18632-201ENSMUST00000222597 2087 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PrkdcP97313 Nup210l-202ENSMUST00000200410 5710 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
PrkdcP97313 Gm7206-201ENSMUST00000117730 508 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 Gm4989-201ENSMUST00000118711 749 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.78
PrkdcP97313 Gm25176-201ENSMUST00000122640 125 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC3.9□□□□□ -1.78
PrkdcP97313 Gm27834-201ENSMUST00000183427 125 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 Gm28116-201ENSMUST00000189064 387 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 Gm37491-201ENSMUST00000192552 1111 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 Gm8458-201ENSMUST00000196658 819 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 AC125539.2-202ENSMUST00000227983 587 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 AC125539.2-201ENSMUST00000228339 753 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 Gm24029-201ENSMUST00000083928 143 ntBASIC3.9□□□□□ -1.78
PrkdcP97313 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PrkdcP97313 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PrkdcP97313 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Gm8980-201ENSMUST00000140232 2197 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Gm43336-201ENSMUST00000200487 4504 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
PrkdcP97313 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Gm37482-201ENSMUST00000194899 2791 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC3.9□□□□□ -1.79
PrkdcP97313 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PrkdcP97313 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PrkdcP97313 Gm20287-201ENSMUST00000172848 2367 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 Gm3362-201ENSMUST00000148102 466 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC3.9□□□□□ -1.79
PrkdcP97313 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 Gm45610-201ENSMUST00000209227 784 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 Gm8264-201ENSMUST00000217801 465 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 Gm8158-201ENSMUST00000219220 465 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 Gm8112-201ENSMUST00000219637 465 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 AC152169.2-201ENSMUST00000224558 613 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 AC152394.2-202ENSMUST00000228503 1064 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PrkdcP97313 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC3.9□□□□□ -1.79
PrkdcP97313 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PrkdcP97313 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC3.9□□□□□ -1.79
PrkdcP97313 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PrkdcP97313 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
PrkdcP97313 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
PrkdcP97313 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PrkdcP97313 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PrkdcP97313 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PrkdcP97313 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm20480-201ENSMUST00000173953 250 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Gm23872-201ENSMUST00000175432 77 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Gm43629-201ENSMUST00000201782 704 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Gm21041-201ENSMUST00000214829 823 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 AC139350.2-201ENSMUST00000226508 2331 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm21036-201ENSMUST00000207544 2611 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 AC102847.2-201ENSMUST00000227799 2906 ntBASIC3.89□□□□□ -1.79
PrkdcP97313 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC3.89□□□□□ -1.79
PrkdcP97313 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PrkdcP97313 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PrkdcP97313 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms