Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Rpl39P62892 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Rpl39P62892 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Rpl39P62892 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.02□□□□□ -1.77
Rpl39P62892 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Rpl39P62892 AC117608.2-201ENSMUST00000224124 1363 ntBASIC4.02□□□□□ -1.77
Rpl39P62892 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Rpl39P62892 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 AC132465.1-201ENSMUST00000219938 1307 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Rpl39P62892 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Rpl39P62892 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm25396-201ENSMUST00000103981 133 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Gm25345-201ENSMUST00000104505 133 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm11517-201ENSMUST00000119491 387 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Gm14054-201ENSMUST00000120744 704 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm16125-201ENSMUST00000159003 339 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Rpl39P62892 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm18700-201ENSMUST00000185791 553 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC4.01□□□□□ -1.77
Rpl39P62892 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm4322-201ENSMUST00000191094 336 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm43396-201ENSMUST00000197506 706 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm44219-201ENSMUST00000203005 273 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Gm43906-201ENSMUST00000203194 906 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Gm5735-201ENSMUST00000207053 167 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC4.01□□□□□ -1.77
Rpl39P62892 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.01□□□□□ -1.77
Rpl39P62892 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Rpl39P62892 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Rpl39P62892 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Rpl39P62892 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm45201-201ENSMUST00000207187 2679 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Rpl39P62892 Gm36936-201ENSMUST00000194508 2749 ntBASIC4.01□□□□□ -1.77
Rpl39P62892 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Rpl39P62892 Gm38284-201ENSMUST00000194803 4539 ntBASIC4□□□□□ -1.77
Rpl39P62892 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Rpl39P62892 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
Rpl39P62892 Gm9577-201ENSMUST00000174655 2620 ntBASIC4□□□□□ -1.77
Rpl39P62892 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC4□□□□□ -1.77
Rpl39P62892 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 Mir449c-201ENSMUST00000102192 109 ntBASIC4□□□□□ -1.77
Rpl39P62892 Gm26340-201ENSMUST00000102365 99 ntBASIC4□□□□□ -1.77
Rpl39P62892 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC4□□□□□ -1.77
Rpl39P62892 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC4□□□□□ -1.77
Rpl39P62892 Gm12110-201ENSMUST00000121601 579 ntBASIC4□□□□□ -1.77
Rpl39P62892 Sms-ps-201ENSMUST00000121773 1101 ntBASIC4□□□□□ -1.77
Rpl39P62892 Gm11609-201ENSMUST00000121926 793 ntBASIC4□□□□□ -1.77
Rpl39P62892 Gm23888-201ENSMUST00000122690 253 ntBASIC4□□□□□ -1.77
Rpl39P62892 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC4□□□□□ -1.77
Rpl39P62892 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC4□□□□□ -1.77
Rpl39P62892 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC4□□□□□ -1.77
Rpl39P62892 Gm15970-201ENSMUST00000160623 834 ntBASIC4□□□□□ -1.77
Rpl39P62892 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Rpl39P62892 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Rpl39P62892 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC4□□□□□ -1.77
Rpl39P62892 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Rpl39P62892 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Rpl39P62892 Gm21399-201ENSMUST00000180210 597 ntBASIC4□□□□□ -1.77
Rpl39P62892 Gm26557-201ENSMUST00000180756 493 ntBASIC4□□□□□ -1.77
Rpl39P62892 Vis1-201ENSMUST00000183957 201 ntBASIC4□□□□□ -1.77
Rpl39P62892 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC4□□□□□ -1.77
Rpl39P62892 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4□□□□□ -1.77
Rpl39P62892 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC4□□□□□ -1.77
Rpl39P62892 Gm43222-201ENSMUST00000199013 603 ntBASIC4□□□□□ -1.77
Rpl39P62892 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms