Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm6070-201ENSMUST00000207275 419 ntBASIC7.56□□□□□ -1.2
Msh6P54276 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC7.56□□□□□ -1.2
Msh6P54276 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC7.56□□□□□ -1.2
Msh6P54276 Gm8523-201ENSMUST00000211386 552 ntBASIC7.56□□□□□ -1.2
Msh6P54276 Gm5087-204ENSMUST00000225820 645 ntBASIC7.56□□□□□ -1.2
Msh6P54276 AC123665.6-201ENSMUST00000228568 538 ntBASIC7.56□□□□□ -1.2
Msh6P54276 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Msh6P54276 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Msh6P54276 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
Msh6P54276 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Msh6P54276 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC7.56□□□□□ -1.2
Msh6P54276 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Msh6P54276 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
Msh6P54276 Gm37926-201ENSMUST00000191922 2424 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Malat1-201ENSMUST00000172812 6983 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Gm18852-201ENSMUST00000184149 3593 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Ankrd55-205ENSMUST00000223871 3209 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC7.55□□□□□ -1.2
Msh6P54276 Ear-ps5-201ENSMUST00000164700 463 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Msh6P54276 Gm38015-201ENSMUST00000193048 188 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Gm38670-201ENSMUST00000199248 77 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Gm44184-201ENSMUST00000204290 132 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Gm8039-201ENSMUST00000204758 712 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Gm45249-201ENSMUST00000211021 348 ntBASIC7.55□□□□□ -1.2
Msh6P54276 AC156950.1-201ENSMUST00000219604 456 ntBASIC7.55□□□□□ -1.2
Msh6P54276 AC154452.1-201ENSMUST00000225819 241 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Mir194-1-201ENSMUST00000083647 67 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Gm43745-201ENSMUST00000198085 1883 ntBASIC7.55□□□□□ -1.2
Msh6P54276 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC7.55□□□□□ -1.2
Msh6P54276 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Msh6P54276 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.54□□□□□ -1.2
Msh6P54276 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.54□□□□□ -1.2
Msh6P54276 Gm45633-201ENSMUST00000210669 3253 ntBASIC7.54□□□□□ -1.2
Msh6P54276 Gm9923-201ENSMUST00000217785 1836 ntBASIC7.54□□□□□ -1.2
Msh6P54276 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Msh6P54276 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Msh6P54276 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Msh6P54276 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC7.54□□□□□ -1.2
Msh6P54276 Gm14515-201ENSMUST00000121327 216 ntBASIC7.54□□□□□ -1.2
Msh6P54276 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC7.54□□□□□ -1.2
Msh6P54276 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Msh6P54276 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC7.54□□□□□ -1.2
Msh6P54276 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Gm26106-201ENSMUST00000157254 228 ntBASIC7.54□□□□□ -1.2
Msh6P54276 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC7.54□□□□□ -1.2
Msh6P54276 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC7.54□□□□□ -1.2
Msh6P54276 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
Msh6P54276 Gm37024-201ENSMUST00000192224 868 ntBASIC7.54□□□□□ -1.2
Msh6P54276 Gm37308-201ENSMUST00000194684 100 ntBASIC7.54□□□□□ -1.2
Msh6P54276 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC7.54□□□□□ -1.2
Msh6P54276 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC7.54□□□□□ -1.2
Msh6P54276 Gm17994-201ENSMUST00000209260 533 ntBASIC7.54□□□□□ -1.2
Msh6P54276 AC151971.3-201ENSMUST00000214694 404 ntBASIC7.54□□□□□ -1.2
Msh6P54276 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC7.54□□□□□ -1.2
Msh6P54276 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC7.54□□□□□ -1.2
Msh6P54276 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Msh6P54276 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
Msh6P54276 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Msh6P54276 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.54□□□□□ -1.2
Msh6P54276 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Msh6P54276 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Msh6P54276 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Msh6P54276 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Msh6P54276 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Msh6P54276 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.53□□□□□ -1.2
Msh6P54276 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Msh6P54276 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Msh6P54276 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Msh6P54276 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Msh6P54276 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms