Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm37745-201ENSMUST00000193304 8163 ntBASIC9.01□□□□□ -0.97
Cux1P53564 Gm13681-201ENSMUST00000117925 210 ntBASIC9.01□□□□□ -0.97
Cux1P53564 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cux1P53564 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cux1P53564 Gm24940-201ENSMUST00000158326 108 ntBASIC9.01□□□□□ -0.97
Cux1P53564 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC9.01□□□□□ -0.97
Cux1P53564 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cux1P53564 Gm42814-201ENSMUST00000199370 460 ntBASIC9.01□□□□□ -0.97
Cux1P53564 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC9.01□□□□□ -0.97
Cux1P53564 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cux1P53564 Gm25187-201ENSMUST00000083906 133 ntBASIC9.01□□□□□ -0.97
Cux1P53564 AC155298.1-201ENSMUST00000225350 3250 ntBASIC9.01□□□□□ -0.97
Cux1P53564 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC9.01□□□□□ -0.97
Cux1P53564 Gm15950-201ENSMUST00000162902 1973 ntBASIC9.01□□□□□ -0.97
Cux1P53564 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cux1P53564 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Cux1P53564 Gm15490-201ENSMUST00000119894 387 ntBASIC9□□□□□ -0.97
Cux1P53564 Gm23211-201ENSMUST00000122717 308 ntBASIC9□□□□□ -0.97
Cux1P53564 Gm16112-201ENSMUST00000159075 382 ntBASIC9□□□□□ -0.97
Cux1P53564 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Cux1P53564 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Cux1P53564 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cux1P53564 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Gm45276-201ENSMUST00000209549 1086 ntBASIC9□□□□□ -0.97
Cux1P53564 AC152394.2-202ENSMUST00000228503 1064 ntBASIC9□□□□□ -0.97
Cux1P53564 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cux1P53564 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC9□□□□□ -0.97
Cux1P53564 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Cux1P53564 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC9□□□□□ -0.97
Cux1P53564 Gm23750-201ENSMUST00000104222 132 ntBASIC9□□□□□ -0.97
Cux1P53564 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cux1P53564 Gm13469-201ENSMUST00000118231 350 ntBASIC9□□□□□ -0.97
Cux1P53564 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC9□□□□□ -0.97
Cux1P53564 Gm25227-201ENSMUST00000158204 112 ntBASIC9□□□□□ -0.97
Cux1P53564 Gm24860-201ENSMUST00000158457 276 ntBASIC9□□□□□ -0.97
Cux1P53564 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Gm20368-201ENSMUST00000220716 301 ntBASIC9□□□□□ -0.97
Cux1P53564 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC9□□□□□ -0.97
Cux1P53564 CT485612.1-201ENSMUST00000222555 382 ntBASIC9□□□□□ -0.97
Cux1P53564 AC192088.3-201ENSMUST00000227858 831 ntBASIC9□□□□□ -0.97
Cux1P53564 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cux1P53564 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cux1P53564 Gm23459-201ENSMUST00000083259 131 ntBASIC9□□□□□ -0.97
Cux1P53564 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 AC154630.1-201ENSMUST00000215334 2440 ntBASIC8.99□□□□□ -0.97
Cux1P53564 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC8.99□□□□□ -0.97
Cux1P53564 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.99□□□□□ -0.97
Cux1P53564 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.99□□□□□ -0.97
Cux1P53564 AC116950.1-201ENSMUST00000226322 3250 ntBASIC8.99□□□□□ -0.97
Cux1P53564 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cux1P53564 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.99□□□□□ -0.97
Cux1P53564 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Cux1P53564 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC8.99□□□□□ -0.97
Cux1P53564 Gm7670-201ENSMUST00000121272 641 ntBASIC8.99□□□□□ -0.97
Cux1P53564 Gm15428-201ENSMUST00000121352 333 ntBASIC8.99□□□□□ -0.97
Cux1P53564 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC8.99□□□□□ -0.97
Cux1P53564 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC8.99□□□□□ -0.97
Cux1P53564 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Cux1P53564 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Cux1P53564 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Cux1P53564 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cux1P53564 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cux1P53564 Gm44586-201ENSMUST00000207166 2737 ntBASIC8.99□□□□□ -0.97
Cux1P53564 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cux1P53564 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cux1P53564 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cux1P53564 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cux1P53564 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Cux1P53564 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cux1P53564 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cux1P53564 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.98□□□□□ -0.97
Cux1P53564 Gm18852-201ENSMUST00000184149 3593 ntBASIC8.98□□□□□ -0.97
Cux1P53564 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
Cux1P53564 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cux1P53564 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cux1P53564 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 131.5 ms