Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC6.61□□□□□ -1.35
Shmt1P50431 Gm27210-201ENSMUST00000184263 402 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Gm28080-201ENSMUST00000188552 722 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.61□□□□□ -1.35
Shmt1P50431 Gm21524-201ENSMUST00000190499 696 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm21715-201ENSMUST00000191056 694 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm8009-201ENSMUST00000191672 436 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm37866-201ENSMUST00000191950 696 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm37430-201ENSMUST00000193039 196 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm8860-201ENSMUST00000193160 445 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm3351-201ENSMUST00000193454 505 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm37987-201ENSMUST00000194999 825 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Mir703-201ENSMUST00000197105 109 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.61□□□□□ -1.35
Shmt1P50431 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 AL929265.1-201ENSMUST00000213427 125 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Gm18705-201ENSMUST00000215985 913 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 AC153516.1-201ENSMUST00000217955 779 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.61□□□□□ -1.35
Shmt1P50431 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 AC134864.1-201ENSMUST00000226326 511 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Shmt1P50431 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Shmt1P50431 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Shmt1P50431 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Shmt1P50431 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Shmt1P50431 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.61□□□□□ -1.35
Shmt1P50431 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Shmt1P50431 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Shmt1P50431 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Shmt1P50431 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.61□□□□□ -1.35
Shmt1P50431 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Shmt1P50431 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 Gm16074-201ENSMUST00000119524 444 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 Gm15057-201ENSMUST00000121516 534 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.6□□□□□ -1.35
Shmt1P50431 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.6□□□□□ -1.35
Shmt1P50431 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Gm15256-201ENSMUST00000177793 883 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Shmt1P50431 Gm21542-201ENSMUST00000182307 993 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 Gm37934-201ENSMUST00000192902 402 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 Gm37477-201ENSMUST00000195215 884 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 Gm43392-201ENSMUST00000196560 434 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.6□□□□□ -1.35
Shmt1P50431 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Shmt1P50431 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Shmt1P50431 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Shmt1P50431 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Shmt1P50431 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Shmt1P50431 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Shmt1P50431 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Shmt1P50431 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.6□□□□□ -1.35
Shmt1P50431 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms