Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm2961-201ENSMUST00000211074 772 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm18904-201ENSMUST00000218756 329 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cxcl12P40224 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm24200-201ENSMUST00000082955 157 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Mir31-201ENSMUST00000083474 106 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cxcl12P40224 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
Cxcl12P40224 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Cxcl12P40224 Thap6-201ENSMUST00000191860 3151 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cxcl12P40224 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cxcl12P40224 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Cxcl12P40224 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Cxcl12P40224 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cxcl12P40224 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.16□□□□□ -1.42
Cxcl12P40224 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm22272-201ENSMUST00000104039 134 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm11908-201ENSMUST00000117755 347 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm11909-201ENSMUST00000121424 759 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.16□□□□□ -1.42
Cxcl12P40224 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.16□□□□□ -1.42
Cxcl12P40224 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm23537-201ENSMUST00000157536 330 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 Mir1963-201ENSMUST00000158594 59 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm23011-202ENSMUST00000197855 275 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm8667-201ENSMUST00000211112 449 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm23459-201ENSMUST00000083259 131 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 Mir30b-201ENSMUST00000083542 96 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cxcl12P40224 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cxcl12P40224 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cxcl12P40224 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.16□□□□□ -1.42
Cxcl12P40224 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cxcl12P40224 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Cxcl12P40224 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.16□□□□□ -1.42
Cxcl12P40224 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cxcl12P40224 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Cxcl12P40224 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Cxcl12P40224 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm11318-201ENSMUST00000118640 961 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm15660-201ENSMUST00000118997 478 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm15480-201ENSMUST00000120442 519 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm25383-201ENSMUST00000157810 144 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm17511-201ENSMUST00000172206 342 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm17907-201ENSMUST00000173150 710 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cxcl12P40224 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.15□□□□□ -1.42
Cxcl12P40224 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms