Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm24041-201ENSMUST00000083115 156 ntBASIC7.03□□□□□ -1.28
Traf1P39428 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Traf1P39428 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Traf1P39428 Gm43386-201ENSMUST00000199654 4001 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Gm44667-201ENSMUST00000207632 3337 ntBASIC7.03□□□□□ -1.28
Traf1P39428 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Traf1P39428 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Traf1P39428 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Traf1P39428 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
Traf1P39428 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Traf1P39428 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.28
Traf1P39428 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Traf1P39428 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Traf1P39428 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
Traf1P39428 Gm44901-201ENSMUST00000208157 3977 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Traf1P39428 Gm43900-201ENSMUST00000204868 2669 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Traf1P39428 Gm14563-201ENSMUST00000120571 354 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Gm15959-201ENSMUST00000121724 368 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Gm23050-201ENSMUST00000158775 165 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Traf1P39428 Mirt2-201ENSMUST00000175179 285 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Gm26057-201ENSMUST00000178099 165 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Traf1P39428 Mir6362-201ENSMUST00000184329 107 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Mir6952-201ENSMUST00000185092 61 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC7.02□□□□□ -1.29
Traf1P39428 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC7.02□□□□□ -1.29
Traf1P39428 Gm29551-201ENSMUST00000190913 698 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Gm37609-201ENSMUST00000191778 678 ntBASIC7.02□□□□□ -1.29
Traf1P39428 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC7.02□□□□□ -1.29
Traf1P39428 Gm31861-201ENSMUST00000204563 672 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.02□□□□□ -1.29
Traf1P39428 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC7.02□□□□□ -1.29
Traf1P39428 Gm9237-201ENSMUST00000221499 548 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.29
Traf1P39428 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Traf1P39428 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Traf1P39428 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Traf1P39428 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Traf1P39428 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Traf1P39428 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Traf1P39428 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Traf1P39428 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC7.02□□□□□ -1.29
Traf1P39428 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Traf1P39428 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Gm11290-204ENSMUST00000224688 3042 ntBASIC7.02□□□□□ -1.29
Traf1P39428 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Traf1P39428 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Gm15425-201ENSMUST00000119013 2711 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Traf1P39428 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Traf1P39428 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Gm14367-201ENSMUST00000119214 1497 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Traf1P39428 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Traf1P39428 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Traf1P39428 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Traf1P39428 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Traf1P39428 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Traf1P39428 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Traf1P39428 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Traf1P39428 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Gm14895-201ENSMUST00000121858 1361 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Gm13811-201ENSMUST00000117800 256 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Gm14791-201ENSMUST00000119061 1166 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Gm14098-201ENSMUST00000119295 623 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Gm15331-201ENSMUST00000120225 385 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC7.01□□□□□ -1.29
Traf1P39428 Gm14970-201ENSMUST00000122289 355 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Gm27762-201ENSMUST00000183417 109 ntBASIC7.01□□□□□ -1.29
Traf1P39428 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC7.01□□□□□ -1.29
Traf1P39428 Gm6850-201ENSMUST00000210031 530 ntBASIC7.01□□□□□ -1.29
Traf1P39428 AC154767.2-201ENSMUST00000224584 414 ntBASIC7.01□□□□□ -1.29
Traf1P39428 AC122393.2-201ENSMUST00000226404 1093 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Gm5229-201ENSMUST00000039375 354 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Snora44-201ENSMUST00000082670 129 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Traf1P39428 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Traf1P39428 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Traf1P39428 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Traf1P39428 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.01□□□□□ -1.29
Traf1P39428 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Traf1P39428 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Traf1P39428 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Traf1P39428 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms