Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm9057-201ENSMUST00000198791 296 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC6.07□□□□□ -1.44
Hoxd3P09027 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC6.07□□□□□ -1.44
Hoxd3P09027 AC163041.1-201ENSMUST00000221984 133 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm17229-202ENSMUST00000166792 1753 ntBASIC6.07□□□□□ -1.44
Hoxd3P09027 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC6.07□□□□□ -1.44
Hoxd3P09027 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Hoxd3P09027 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm37066-201ENSMUST00000192713 2061 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm43099-201ENSMUST00000198943 5241 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm15575-201ENSMUST00000119414 1581 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm12394-201ENSMUST00000107981 3348 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Mir688-201ENSMUST00000102055 75 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Hoxd3P09027 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm5319-201ENSMUST00000118965 873 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm14835-201ENSMUST00000119039 315 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm12935-201ENSMUST00000119352 246 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm11862-201ENSMUST00000119678 659 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm12692-201ENSMUST00000121092 546 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm12642-201ENSMUST00000121098 876 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm9428-201ENSMUST00000127214 769 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm371-201ENSMUST00000142240 1245 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Mup-ps2-201ENSMUST00000142602 533 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm15843-201ENSMUST00000146593 529 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm24192-201ENSMUST00000157978 145 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm24130-201ENSMUST00000158536 151 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Ear-ps12-201ENSMUST00000161720 451 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm9071-201ENSMUST00000165915 474 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm25874-201ENSMUST00000178030 79 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm26509-201ENSMUST00000180947 948 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm27617-201ENSMUST00000184321 168 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm27595-201ENSMUST00000184579 112 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm38226-201ENSMUST00000192207 521 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm6074-201ENSMUST00000193340 451 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm38305-201ENSMUST00000194825 223 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm18131-201ENSMUST00000199241 449 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.06□□□□□ -1.44
Hoxd3P09027 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC6.06□□□□□ -1.44
Hoxd3P09027 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms