Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm15216-201ENSMUST00000118058 277 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm11212-201ENSMUST00000118337 618 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm14331-201ENSMUST00000120396 409 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm12308-201ENSMUST00000120440 389 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm21654-201ENSMUST00000188086 691 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm18352-201ENSMUST00000189113 902 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Ighv3-2-201ENSMUST00000191842 349 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm38185-201ENSMUST00000193195 694 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm37784-201ENSMUST00000193233 189 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm43354-201ENSMUST00000196862 346 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm4032-201ENSMUST00000210886 487 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC4.72□□□□□ -1.65
Hmgb3O54879 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 AC079644.3-201ENSMUST00000222452 357 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm18247-201ENSMUST00000222937 601 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm5229-201ENSMUST00000039375 354 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm24041-201ENSMUST00000083115 156 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Hmgb3O54879 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
Hmgb3O54879 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm23979-201ENSMUST00000104071 128 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm22499-201ENSMUST00000104501 135 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Mir292-201ENSMUST00000104847 82 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm22714-201ENSMUST00000116894 78 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm12442-201ENSMUST00000118372 338 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm12099-201ENSMUST00000118660 750 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm25782-201ENSMUST00000122526 289 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm16269-201ENSMUST00000160532 409 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm20453-201ENSMUST00000173968 226 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Mir7029-201ENSMUST00000184777 61 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC4.71□□□□□ -1.66
Hmgb3O54879 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm29124-201ENSMUST00000186576 452 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm38068-201ENSMUST00000192546 540 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC4.71□□□□□ -1.66
Hmgb3O54879 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC4.71□□□□□ -1.66
Hmgb3O54879 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC4.71□□□□□ -1.66
Hmgb3O54879 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm2398-201ENSMUST00000218347 883 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm5928-201ENSMUST00000221839 466 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 AV026068-220ENSMUST00000224153 1147 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 AC161275.1-201ENSMUST00000224668 208 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 AC122533.1-201ENSMUST00000225177 767 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hmgb3O54879 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm25133-201ENSMUST00000082647 130 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Snora30-201ENSMUST00000083325 130 ntBASIC4.71□□□□□ -1.66
Hmgb3O54879 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Hmgb3O54879 Gm6818-201ENSMUST00000190556 2558 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms