Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 AC130827.1-201ENSMUST00000220476 3850 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm44677-201ENSMUST00000209151 3739 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm14510-201ENSMUST00000116165 1092 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm15428-201ENSMUST00000121352 333 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm15877-201ENSMUST00000121897 964 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm8669-201ENSMUST00000183839 945 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm28976-201ENSMUST00000188070 144 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm29284-201ENSMUST00000188363 255 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm44952-201ENSMUST00000204443 433 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm19174-201ENSMUST00000216944 956 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 CT025616.1-201ENSMUST00000221158 412 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 AC117797.1-201ENSMUST00000223977 695 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 n-R5s161-201ENSMUST00000083728 114 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 CT025686.2-201ENSMUST00000227898 3315 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Ankrd55-205ENSMUST00000223871 3209 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm25415-201ENSMUST00000104220 132 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm13899-201ENSMUST00000121519 1255 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm25383-201ENSMUST00000157810 144 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm3216-201ENSMUST00000166927 486 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm3141-201ENSMUST00000168726 499 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm22355-201ENSMUST00000175531 96 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm37681-201ENSMUST00000193880 727 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm44053-201ENSMUST00000203364 929 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm45660-201ENSMUST00000210267 151 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm43258-201ENSMUST00000200312 1950 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 AC158938.1-201ENSMUST00000225372 6720 ntBASIC4.97□□□□□ -1.61
Col6a4A2AX52 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a4A2AX52 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Gm43900-201ENSMUST00000204868 2669 ntBASIC4.96□□□□□ -1.61
Col6a4A2AX52 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Gm13818-201ENSMUST00000119441 511 ntBASIC4.96□□□□□ -1.61
Col6a4A2AX52 Gm15120-201ENSMUST00000120602 301 ntBASIC4.96□□□□□ -1.61
Col6a4A2AX52 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a4A2AX52 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC4.96□□□□□ -1.61
Col6a4A2AX52 Gm21399-201ENSMUST00000180210 597 ntBASIC4.96□□□□□ -1.61
Col6a4A2AX52 Mir6943-201ENSMUST00000185186 66 ntBASIC4.96□□□□□ -1.61
Col6a4A2AX52 Gm8367-201ENSMUST00000186145 887 ntBASIC4.96□□□□□ -1.61
Col6a4A2AX52 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC4.96□□□□□ -1.61
Col6a4A2AX52 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Gm43561-201ENSMUST00000199866 448 ntBASIC4.96□□□□□ -1.61
Col6a4A2AX52 Gm43235-201ENSMUST00000200121 297 ntBASIC4.96□□□□□ -1.61
Col6a4A2AX52 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a4A2AX52 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a4A2AX52 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a4A2AX52 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a4A2AX52 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a4A2AX52 Gm37040-201ENSMUST00000191740 1824 ntBASIC4.96□□□□□ -1.62
Col6a4A2AX52 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a4A2AX52 Gm42630-201ENSMUST00000195908 3448 ntBASIC4.96□□□□□ -1.62
Col6a4A2AX52 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a4A2AX52 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Col6a4A2AX52 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC4.96□□□□□ -1.62
Col6a4A2AX52 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a4A2AX52 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a4A2AX52 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a4A2AX52 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms