Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm27855-201ENSMUST00000184122 128 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm38384-201ENSMUST00000195413 1122 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 AC153937.1-201ENSMUST00000218734 412 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Scn3aA2ASI5 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Gm22596-201ENSMUST00000157601 316 ntBASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Gm20549-201ENSMUST00000174804 429 ntBASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Gm22650-201ENSMUST00000175138 105 ntBASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Gm29159-201ENSMUST00000187969 379 ntBASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.51□□□□□ -1.37
Scn3aA2ASI5 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Scn3aA2ASI5 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm23211-201ENSMUST00000122717 308 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm31306-201ENSMUST00000197517 508 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm11908-201ENSMUST00000117755 347 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm11825-201ENSMUST00000120710 736 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm25824-201ENSMUST00000157092 121 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm26738-201ENSMUST00000181312 601 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm8581-201ENSMUST00000188636 890 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm18553-201ENSMUST00000194152 634 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm44539-201ENSMUST00000206010 238 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm5027-201ENSMUST00000206700 375 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm5735-201ENSMUST00000207053 167 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm7990-201ENSMUST00000212126 593 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Gm7768-201ENSMUST00000222988 597 ntBASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Scn3aA2ASI5 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scn3aA2ASI5 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms