Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
CtcflA2APF3 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CtcflA2APF3 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm12842-201ENSMUST00000117298 476 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm8855-201ENSMUST00000118888 878 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm8648-201ENSMUST00000122457 221 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm2619-202ENSMUST00000166777 651 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm10136-201ENSMUST00000183196 435 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm27295-201ENSMUST00000184264 153 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm43383-201ENSMUST00000195981 469 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 AC151967.1-201ENSMUST00000198146 76 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm45626-201ENSMUST00000210093 361 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 AL929555.1-201ENSMUST00000215283 509 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
CtcflA2APF3 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CtcflA2APF3 Mir425-201ENSMUST00000083645 85 ntBASIC5.41□□□□□ -1.54
CtcflA2APF3 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CtcflA2APF3 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CtcflA2APF3 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.41□□□□□ -1.54
CtcflA2APF3 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.41□□□□□ -1.54
CtcflA2APF3 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
CtcflA2APF3 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CtcflA2APF3 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.4□□□□□ -1.54
CtcflA2APF3 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CtcflA2APF3 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CtcflA2APF3 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CtcflA2APF3 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CtcflA2APF3 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CtcflA2APF3 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CtcflA2APF3 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.4□□□□□ -1.54
CtcflA2APF3 Mir1945-201ENSMUST00000157919 78 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm24363-201ENSMUST00000158440 311 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.4□□□□□ -1.54
CtcflA2APF3 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm2229-201ENSMUST00000193328 710 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Ighv5-5-201ENSMUST00000193826 329 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.4□□□□□ -1.54
CtcflA2APF3 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.4□□□□□ -1.54
CtcflA2APF3 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm44809-201ENSMUST00000208305 993 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm19196-201ENSMUST00000209258 357 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 AC069561.1-201ENSMUST00000213750 424 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm18996-201ENSMUST00000214851 755 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm6575-201ENSMUST00000222946 697 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CtcflA2APF3 CT030645.2-201ENSMUST00000224321 1012 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.4□□□□□ -1.54
CtcflA2APF3 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CtcflA2APF3 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CtcflA2APF3 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CtcflA2APF3 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CtcflA2APF3 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CtcflA2APF3 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CtcflA2APF3 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CtcflA2APF3 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CtcflA2APF3 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.4□□□□□ -1.55
CtcflA2APF3 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.4□□□□□ -1.55
CtcflA2APF3 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.4□□□□□ -1.55
CtcflA2APF3 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.4□□□□□ -1.55
CtcflA2APF3 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.4□□□□□ -1.55
CtcflA2APF3 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CtcflA2APF3 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CtcflA2APF3 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms