Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.75□□□□□ -1.33
Smc1aQ9CU62 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm23440-201ENSMUST00000104299 130 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm24989-201ENSMUST00000104461 88 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm22952-201ENSMUST00000116720 120 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm22103-201ENSMUST00000116733 121 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm26475-201ENSMUST00000116769 121 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm23620-201ENSMUST00000116812 121 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm25042-201ENSMUST00000116856 121 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm25540-201ENSMUST00000116880 121 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm15016-201ENSMUST00000117300 720 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm11533-201ENSMUST00000120287 477 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm8317-201ENSMUST00000121261 471 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm26167-201ENSMUST00000158423 253 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm23550-201ENSMUST00000179003 121 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm25123-201ENSMUST00000179154 121 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm25353-201ENSMUST00000179366 121 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm22992-201ENSMUST00000179496 121 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm25892-201ENSMUST00000179867 121 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm24092-201ENSMUST00000180257 121 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm26923-201ENSMUST00000182615 996 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Mir7037-201ENSMUST00000184414 65 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm8009-201ENSMUST00000191672 436 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm37517-201ENSMUST00000194004 1289 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm19033-201ENSMUST00000208516 964 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm24454-201ENSMUST00000083349 132 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.74□□□□□ -1.33
Smc1aQ9CU62 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm12643-201ENSMUST00000116078 374 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm14805-201ENSMUST00000120172 340 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm23030-201ENSMUST00000158004 273 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm23995-201ENSMUST00000158060 129 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm24179-201ENSMUST00000158925 127 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm27762-201ENSMUST00000183417 109 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm37103-201ENSMUST00000191830 115 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm9321-201ENSMUST00000221179 778 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Smc1aQ9CU62 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms