Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm27998-201ENSMUST00000184902 361 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm29492-201ENSMUST00000187124 457 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm20561-201ENSMUST00000188131 292 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm37784-201ENSMUST00000193233 189 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm5027-201ENSMUST00000206700 375 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm6070-201ENSMUST00000207275 419 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm45247-201ENSMUST00000210757 309 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 AV026068-218ENSMUST00000223980 575 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 AC154252.1-201ENSMUST00000226041 473 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdha9Q91Y11 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm15780-201ENSMUST00000121283 935 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm24380-201ENSMUST00000122696 324 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm22701-201ENSMUST00000175371 291 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Mir7685-201ENSMUST00000183555 62 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm29464-201ENSMUST00000187692 513 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm28507-201ENSMUST00000189737 703 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Pcdha9Q91Y11 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdha9Q91Y11 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms