Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Prpf39Q8K2Z2 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Prpf39Q8K2Z2 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Prpf39Q8K2Z2 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Prpf39Q8K2Z2 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Prpf39Q8K2Z2 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm26144-201ENSMUST00000104475 132 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm26146-201ENSMUST00000104478 185 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm13771-201ENSMUST00000117988 238 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm6744-201ENSMUST00000119303 543 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm25117-201ENSMUST00000157194 144 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm26410-201ENSMUST00000157670 261 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm24733-201ENSMUST00000158863 253 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm17366-201ENSMUST00000167629 187 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm9671-201ENSMUST00000171502 547 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm27512-201ENSMUST00000175328 126 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm19087-201ENSMUST00000191430 946 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm37196-201ENSMUST00000194762 906 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Prpf39Q8K2Z2 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm7146-201ENSMUST00000116079 739 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm12077-201ENSMUST00000117049 364 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm14998-201ENSMUST00000120502 495 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm12618-201ENSMUST00000121754 483 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm13531-201ENSMUST00000121893 543 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm14970-201ENSMUST00000122289 355 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm24179-201ENSMUST00000158925 127 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm8183-201ENSMUST00000183134 980 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm37355-201ENSMUST00000193345 606 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm37341-201ENSMUST00000194680 371 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm5990-201ENSMUST00000203126 746 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm4083-201ENSMUST00000207158 451 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Prpf39Q8K2Z2 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Mir449c-201ENSMUST00000102192 109 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm23440-201ENSMUST00000104299 130 ntBASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.18□□□□□ -1.42
Prpf39Q8K2Z2 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms