Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm2058-201ENSMUST00000178791 560 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm7745-201ENSMUST00000182235 973 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm8367-201ENSMUST00000186145 887 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm17934-201ENSMUST00000192818 422 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm37784-201ENSMUST00000193233 189 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm42886-201ENSMUST00000199214 466 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm5318-201ENSMUST00000205249 406 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 AC164618.3-201ENSMUST00000224863 681 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 AC166105.1-201ENSMUST00000227512 482 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm37248-201ENSMUST00000193576 3174 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 AC166358.5-201ENSMUST00000220706 1302 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nup88Q8CEC0 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm5832-201ENSMUST00000121704 1582 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nup88Q8CEC0 AC163731.1-201ENSMUST00000225696 3118 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC7□□□□□ -1.29
Nup88Q8CEC0 AC155167.2-201ENSMUST00000226127 1945 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nup88Q8CEC0 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm20486-201ENSMUST00000101544 128 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
Nup88Q8CEC0 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nup88Q8CEC0 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm12193-201ENSMUST00000117250 379 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm13428-201ENSMUST00000117540 365 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm16074-201ENSMUST00000119524 444 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm13593-201ENSMUST00000121329 692 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm23539-201ENSMUST00000157537 224 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm22599-201ENSMUST00000157597 132 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm25013-201ENSMUST00000158402 128 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm9597-201ENSMUST00000171913 602 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm3715-201ENSMUST00000172308 617 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm29111-201ENSMUST00000188823 696 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm29551-201ENSMUST00000190913 698 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm28584-201ENSMUST00000191489 696 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm38138-201ENSMUST00000193274 696 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm37991-201ENSMUST00000194297 696 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC7□□□□□ -1.29
Nup88Q8CEC0 AC156037.1-201ENSMUST00000221133 127 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 AC125543.3-201ENSMUST00000221991 126 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 AC107757.1-201ENSMUST00000226780 357 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nup88Q8CEC0 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm4994-201ENSMUST00000118379 2187 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nup88Q8CEC0 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm5949-201ENSMUST00000213468 1421 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nup88Q8CEC0 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Nup88Q8CEC0 AC124516.1-201ENSMUST00000221845 3544 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 Gm42998-201ENSMUST00000197053 2371 ntBASIC7□□□□□ -1.29
Nup88Q8CEC0 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Gm11852-201ENSMUST00000120806 222 ntBASIC6.99□□□□□ -1.29
Nup88Q8CEC0 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 492.4 ms