Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC8.27□□□□□ -1.09
Usp47Q8BY87 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC8.27□□□□□ -1.09
Usp47Q8BY87 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Gm27855-201ENSMUST00000184122 128 ntBASIC8.27□□□□□ -1.09
Usp47Q8BY87 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Usp47Q8BY87 AC126554.2-201ENSMUST00000223259 400 ntBASIC8.27□□□□□ -1.09
Usp47Q8BY87 Gm7887-201ENSMUST00000056948 537 ntBASIC8.27□□□□□ -1.09
Usp47Q8BY87 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 n-R5s36-201ENSMUST00000082998 119 ntBASIC8.27□□□□□ -1.09
Usp47Q8BY87 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.27□□□□□ -1.09
Usp47Q8BY87 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.27□□□□□ -1.09
Usp47Q8BY87 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp47Q8BY87 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Gm15073-201ENSMUST00000117432 634 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Gm11774-201ENSMUST00000118601 293 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Mir1945-201ENSMUST00000157919 78 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Gm17121-201ENSMUST00000170414 847 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Gm17222-201ENSMUST00000180135 847 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Gm31166-201ENSMUST00000209326 288 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Gm4012-201ENSMUST00000221504 581 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Gm5087-204ENSMUST00000225820 645 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp47Q8BY87 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Gm23795-201ENSMUST00000084006 137 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Gm17165-201ENSMUST00000096155 493 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp47Q8BY87 CT025604.1-201ENSMUST00000221111 3436 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp47Q8BY87 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp47Q8BY87 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp47Q8BY87 Gm38451-201ENSMUST00000208329 2646 ntBASIC8.26□□□□□ -1.09
Usp47Q8BY87 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC8.25□□□□□ -1.09
Usp47Q8BY87 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.25□□□□□ -1.09
Usp47Q8BY87 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Gm26078-201ENSMUST00000104067 128 ntBASIC8.25□□□□□ -1.09
Usp47Q8BY87 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC8.25□□□□□ -1.09
Usp47Q8BY87 Gm15044-201ENSMUST00000120703 598 ntBASIC8.25□□□□□ -1.09
Usp47Q8BY87 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Gm22650-201ENSMUST00000175138 105 ntBASIC8.25□□□□□ -1.09
Usp47Q8BY87 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Gm38181-201ENSMUST00000181357 720 ntBASIC8.25□□□□□ -1.09
Usp47Q8BY87 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 AC156802.1-201ENSMUST00000223623 579 ntBASIC8.25□□□□□ -1.09
Usp47Q8BY87 AC152394.2-202ENSMUST00000228503 1064 ntBASIC8.25□□□□□ -1.09
Usp47Q8BY87 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Gm38224-201ENSMUST00000191648 2100 ntBASIC8.25□□□□□ -1.09
Usp47Q8BY87 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp47Q8BY87 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Usp47Q8BY87 Gm11737-201ENSMUST00000118713 468 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms