Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm12697-201ENSMUST00000118008 667 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm15331-201ENSMUST00000120225 385 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm13531-201ENSMUST00000121893 543 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm22636-201ENSMUST00000158142 275 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm16531-201ENSMUST00000180658 967 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm38181-201ENSMUST00000181357 720 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm5430-201ENSMUST00000182525 915 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm34149-201ENSMUST00000203547 304 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 AC124826.1-201ENSMUST00000221651 325 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Desi2-202ENSMUST00000069568 1193 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm12057-201ENSMUST00000117244 1427 ntBASIC8.37□□□□□ -1.07
Usp40Q8BWR4 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm12494-201ENSMUST00000121684 521 ntBASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm18547-201ENSMUST00000192439 811 ntBASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Igkv4-75-201ENSMUST00000197204 359 ntBASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm5229-201ENSMUST00000039375 354 ntBASIC8.37□□□□□ -1.07
Usp40Q8BWR4 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm16335-201ENSMUST00000077495 309 ntBASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm37894-201ENSMUST00000195416 2599 ntBASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Gm43258-201ENSMUST00000200312 1950 ntBASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.37□□□□□ -1.07
Usp40Q8BWR4 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm26067-201ENSMUST00000103789 110 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm12748-201ENSMUST00000120763 504 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm14713-201ENSMUST00000122362 686 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm14349-201ENSMUST00000137155 902 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Mir7008-201ENSMUST00000184398 63 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm37838-201ENSMUST00000194464 312 ntBASIC8.36□□□□□ -1.07
Usp40Q8BWR4 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC8.36□□□□□ -1.07
Usp40Q8BWR4 Gm44494-201ENSMUST00000196760 129 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms