Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm23624-201ENSMUST00000082463 321 ntBASIC8.34□□□□□ -1.07
Usp54Q8BL06 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp54Q8BL06 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp54Q8BL06 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp54Q8BL06 Gm8401-201ENSMUST00000120248 1739 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 AC122346.1-201ENSMUST00000225266 3732 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm13488-201ENSMUST00000120419 179 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm14515-201ENSMUST00000121327 216 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm23211-201ENSMUST00000122717 308 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm15838-201ENSMUST00000161575 180 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm44456-201ENSMUST00000196554 89 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm43794-201ENSMUST00000200971 692 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm45660-201ENSMUST00000210267 151 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 AC162467.1-201ENSMUST00000220254 621 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 AC152394.2-202ENSMUST00000228503 1064 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Clec2j-201ENSMUST00000032517 515 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm37086-201ENSMUST00000193082 3452 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 AC154576.1-202ENSMUST00000223966 3320 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.33□□□□□ -1.08
Usp54Q8BL06 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Gm22273-201ENSMUST00000104040 132 ntBASIC8.32□□□□□ -1.08
Usp54Q8BL06 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp54Q8BL06 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Gm45525-201ENSMUST00000210800 389 ntBASIC8.32□□□□□ -1.08
Usp54Q8BL06 Gm40692-201ENSMUST00000220411 491 ntBASIC8.32□□□□□ -1.08
Usp54Q8BL06 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Mir449a-201ENSMUST00000083641 91 ntBASIC8.32□□□□□ -1.08
Usp54Q8BL06 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Usp54Q8BL06 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.32□□□□□ -1.08
Usp54Q8BL06 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp54Q8BL06 AC116950.1-201ENSMUST00000226322 3250 ntBASIC8.32□□□□□ -1.08
Usp54Q8BL06 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Gm44667-201ENSMUST00000207632 3337 ntBASIC8.32□□□□□ -1.08
Usp54Q8BL06 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp54Q8BL06 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.31□□□□□ -1.08
Usp54Q8BL06 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Gm12732-201ENSMUST00000121688 180 ntBASIC8.31□□□□□ -1.08
Usp54Q8BL06 Gm22650-201ENSMUST00000175138 105 ntBASIC8.31□□□□□ -1.08
Usp54Q8BL06 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Gm19189-201ENSMUST00000221689 754 ntBASIC8.31□□□□□ -1.08
Usp54Q8BL06 AL807824.1-201ENSMUST00000223151 183 ntBASIC8.31□□□□□ -1.08
Usp54Q8BL06 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp54Q8BL06 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms