Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 AC129308.2-203ENSMUST00000224109 2385 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Snord88a-201ENSMUST00000116723 90 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm11406-201ENSMUST00000117418 484 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm4910-201ENSMUST00000119605 366 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm14741-201ENSMUST00000120777 1009 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm12369-201ENSMUST00000121343 942 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm14800-201ENSMUST00000122084 1272 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm14353-201ENSMUST00000122200 869 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm12778-201ENSMUST00000122341 333 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Mir1900-201ENSMUST00000122714 78 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm25722-201ENSMUST00000157498 279 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm22311-201ENSMUST00000158006 110 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm23891-201ENSMUST00000158114 138 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm8614-201ENSMUST00000182528 978 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Mir6337-201ENSMUST00000184194 105 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm29197-201ENSMUST00000185922 702 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm3496-201ENSMUST00000188283 745 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm37620-201ENSMUST00000192910 501 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm45343-201ENSMUST00000210452 828 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Olfr809-203ENSMUST00000218237 1100 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 AC154851.2-201ENSMUST00000222172 644 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 AC091783.3-201ENSMUST00000223969 681 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Cdx4Q07424 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx4Q07424 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 CT009757.4-201ENSMUST00000221520 2541 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx4Q07424 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.07□□□□□ -1.6
Cdx4Q07424 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms