Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Rfx1P48377 Gm23437-201ENSMUST00000104036 127 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm26417-201ENSMUST00000104274 135 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm7091-201ENSMUST00000116438 586 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm11406-201ENSMUST00000117418 484 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm12026-201ENSMUST00000120961 1024 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm16412-201ENSMUST00000121602 273 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm24647-201ENSMUST00000157112 113 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm26183-201ENSMUST00000157685 139 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm10177-202ENSMUST00000161698 207 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Rfx1P48377 Gm8032-201ENSMUST00000171009 574 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Rfx1P48377 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Gm28801-201ENSMUST00000188761 449 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm37585-201ENSMUST00000195440 280 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm22897-202ENSMUST00000197782 127 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Gm2860-201ENSMUST00000199226 707 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.92□□□□□ -1.14
Rfx1P48377 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.92□□□□□ -1.14
Rfx1P48377 Gm45458-201ENSMUST00000209900 522 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC7.92□□□□□ -1.14
Rfx1P48377 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 AL935138.1-201ENSMUST00000215309 196 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC7.92□□□□□ -1.14
Rfx1P48377 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 AC154198.1-201ENSMUST00000222839 424 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 AC154335.1-201ENSMUST00000224744 395 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Rfx1P48377 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Rfx1P48377 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Gm7680-201ENSMUST00000216198 1348 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Rfx1P48377 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.92□□□□□ -1.14
Rfx1P48377 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Rfx1P48377 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Rfx1P48377 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Rfx1P48377 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Rfx1P48377 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Rfx1P48377 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Rfx1P48377 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Rfx1P48377 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Rfx1P48377 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm42508-201ENSMUST00000199972 3292 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Rfx1P48377 Gm38377-201ENSMUST00000193253 3772 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Rfx1P48377 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm14854-201ENSMUST00000117758 841 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm13902-201ENSMUST00000120168 605 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm15193-201ENSMUST00000120224 865 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm14360-201ENSMUST00000120670 393 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Klra11-ps-201ENSMUST00000122033 810 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Rfx1P48377 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Rfx1P48377 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC7.91□□□□□ -1.14
Rfx1P48377 Gm9697-201ENSMUST00000147052 997 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm25277-201ENSMUST00000157266 324 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Mir1929-201ENSMUST00000158635 93 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm2855-201ENSMUST00000166765 456 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC7.91□□□□□ -1.14
Rfx1P48377 Gm26381-201ENSMUST00000174895 92 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.91□□□□□ -1.14
Rfx1P48377 Gm27684-201ENSMUST00000183778 80 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Rfx1P48377 Gm9419-201ENSMUST00000200672 567 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm44431-201ENSMUST00000203500 413 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm44135-201ENSMUST00000205221 368 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC7.91□□□□□ -1.14
Rfx1P48377 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.91□□□□□ -1.14
Rfx1P48377 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Rfx1P48377 AC124569.4-201ENSMUST00000223830 1220 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Rfx1P48377 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Rfx1P48377 Gm6054-201ENSMUST00000078052 378 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Rfx1P48377 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
Rfx1P48377 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Rfx1P48377 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.91□□□□□ -1.14
Rfx1P48377 Gm37181-201ENSMUST00000192513 1727 ntBASIC7.91□□□□□ -1.14
Rfx1P48377 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms