Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm13770-201ENSMUST00000117149 305 ntBASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm15044-201ENSMUST00000120703 598 ntBASIC6.19□□□□□ -1.42
Cxcl12P40224 Mir7056-201ENSMUST00000183776 59 ntBASIC6.19□□□□□ -1.42
Cxcl12P40224 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm28507-201ENSMUST00000189737 703 ntBASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm8480-201ENSMUST00000190350 698 ntBASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm43744-201ENSMUST00000196387 688 ntBASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm5373-201ENSMUST00000212113 1050 ntBASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm18587-201ENSMUST00000213736 841 ntBASIC6.19□□□□□ -1.42
Cxcl12P40224 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.19□□□□□ -1.42
Cxcl12P40224 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.19□□□□□ -1.42
Cxcl12P40224 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cxcl12P40224 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Cxcl12P40224 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cxcl12P40224 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.18□□□□□ -1.42
Cxcl12P40224 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Cxcl12P40224 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cxcl12P40224 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm13493-201ENSMUST00000120318 493 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm15187-201ENSMUST00000122329 264 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm14349-201ENSMUST00000137155 902 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm23233-201ENSMUST00000157301 137 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm8358-201ENSMUST00000167222 555 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm22132-201ENSMUST00000175316 100 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm5946-201ENSMUST00000182340 970 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Mir6963-201ENSMUST00000183535 71 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.18□□□□□ -1.42
Cxcl12P40224 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm44132-201ENSMUST00000205142 151 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm5318-201ENSMUST00000205249 406 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm45082-201ENSMUST00000206082 601 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.18□□□□□ -1.42
Cxcl12P40224 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.18□□□□□ -1.42
Cxcl12P40224 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.18□□□□□ -1.42
Cxcl12P40224 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.18□□□□□ -1.42
Cxcl12P40224 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cxcl12P40224 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.18□□□□□ -1.42
Cxcl12P40224 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cxcl12P40224 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.18□□□□□ -1.42
Cxcl12P40224 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cxcl12P40224 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cxcl12P40224 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cxcl12P40224 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm24265-201ENSMUST00000101833 141 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm13473-201ENSMUST00000119289 367 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm16060-201ENSMUST00000153140 478 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm22122-201ENSMUST00000175147 200 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm24407-201ENSMUST00000177864 141 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cxcl12P40224 Mir6343-201ENSMUST00000183584 84 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm8367-201ENSMUST00000186145 887 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Gm28973-201ENSMUST00000189310 613 ntBASIC6.17□□□□□ -1.42
Cxcl12P40224 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms