Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.82□□□□□ -1
Chd1P40201 Gm37648-201ENSMUST00000192072 2563 ntBASIC8.82□□□□□ -1
Chd1P40201 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Chd1P40201 AC117769.3-201ENSMUST00000225814 1664 ntBASIC8.82□□□□□ -1
Chd1P40201 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Chd1P40201 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC8.82□□□□□ -1
Chd1P40201 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC8.82□□□□□ -1
Chd1P40201 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC8.82□□□□□ -1
Chd1P40201 Gm4290-201ENSMUST00000206897 814 ntBASIC8.82□□□□□ -1
Chd1P40201 Gm20586-201ENSMUST00000210122 547 ntBASIC8.82□□□□□ -1
Chd1P40201 Gm8942-201ENSMUST00000217892 400 ntBASIC8.82□□□□□ -1
Chd1P40201 Gm2099-201ENSMUST00000220979 412 ntBASIC8.82□□□□□ -1
Chd1P40201 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC8.82□□□□□ -1
Chd1P40201 Gm24706-201ENSMUST00000082806 137 ntBASIC8.82□□□□□ -1
Chd1P40201 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Chd1P40201 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Chd1P40201 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Chd1P40201 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC8.82□□□□□ -1
Chd1P40201 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC8.82□□□□□ -1
Chd1P40201 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC8.82□□□□□ -1
Chd1P40201 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC8.82□□□□□ -1
Chd1P40201 Gm28874-201ENSMUST00000190917 3134 ntBASIC8.81□□□□□ -1
Chd1P40201 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.81□□□□□ -1
Chd1P40201 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.81□□□□□ -1
Chd1P40201 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Chd1P40201 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.81□□□□□ -1
Chd1P40201 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC8.81□□□□□ -1
Chd1P40201 Gm6081-201ENSMUST00000134472 489 ntBASIC8.81□□□□□ -1
Chd1P40201 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC8.81□□□□□ -1
Chd1P40201 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC8.81□□□□□ -1
Chd1P40201 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Chd1P40201 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Chd1P40201 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC8.81□□□□□ -1
Chd1P40201 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Chd1P40201 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 AC152979.3-201ENSMUST00000217720 479 ntBASIC8.81□□□□□ -1
Chd1P40201 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 Mir129-1-201ENSMUST00000083535 73 ntBASIC8.81□□□□□ -1
Chd1P40201 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC8.81□□□□□ -1
Chd1P40201 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Chd1P40201 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 Gm13590-201ENSMUST00000120183 1588 ntBASIC8.81□□□□□ -1
Chd1P40201 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Chd1P40201 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Chd1P40201 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Chd1P40201 Gm8853-201ENSMUST00000198366 1344 ntBASIC8.81□□□□□ -1
Chd1P40201 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC8.8□□□□□ -1
Chd1P40201 Gm23631-201ENSMUST00000175291 123 ntBASIC8.8□□□□□ -1
Chd1P40201 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Ighv1-45-201ENSMUST00000193677 352 ntBASIC8.8□□□□□ -1
Chd1P40201 Gm4714-201ENSMUST00000203395 279 ntBASIC8.8□□□□□ -1
Chd1P40201 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Gm8291-201ENSMUST00000209635 1261 ntBASIC8.8□□□□□ -1
Chd1P40201 AC153943.1-201ENSMUST00000219312 256 ntBASIC8.8□□□□□ -1
Chd1P40201 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC8.8□□□□□ -1
Chd1P40201 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Chd1P40201 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC8.8□□□□□ -1
Chd1P40201 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Chd1P40201 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Chd1P40201 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Chd1P40201 AC154841.1-201ENSMUST00000227263 1479 ntBASIC8.8□□□□□ -1
Chd1P40201 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC8.8□□□□□ -1
Chd1P40201 Mir1947-201ENSMUST00000158235 85 ntBASIC8.8□□□□□ -1
Chd1P40201 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC8.8□□□□□ -1
Chd1P40201 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC8.8□□□□□ -1
Chd1P40201 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC8.8□□□□□ -1
Chd1P40201 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms