Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm8692-201ENSMUST00000118102 438 ntBASIC5.27□□□□□ -1.57
P20040 Zfp389-201ENSMUST00000118425 675 ntBASIC5.27□□□□□ -1.57
P20040 Gm13835-201ENSMUST00000118459 685 ntBASIC5.27□□□□□ -1.57
P20040 Gm13818-201ENSMUST00000119441 511 ntBASIC5.27□□□□□ -1.57
P20040 Gm6446-201ENSMUST00000120604 818 ntBASIC5.27□□□□□ -1.57
P20040 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.27□□□□□ -1.57
P20040 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
P20040 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
P20040 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.27□□□□□ -1.57
P20040 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.27□□□□□ -1.57
P20040 Gm20620-201ENSMUST00000177528 168 ntBASIC5.27□□□□□ -1.57
P20040 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.27□□□□□ -1.57
P20040 Mir7082-201ENSMUST00000183526 92 ntBASIC5.27□□□□□ -1.57
P20040 Gm29519-201ENSMUST00000186994 398 ntBASIC5.27□□□□□ -1.57
P20040 Gm28186-201ENSMUST00000187447 679 ntBASIC5.27□□□□□ -1.57
P20040 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.27□□□□□ -1.57
P20040 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
P20040 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.27□□□□□ -1.57
P20040 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.27□□□□□ -1.57
P20040 Gm37901-201ENSMUST00000195107 514 ntBASIC5.27□□□□□ -1.57
P20040 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
P20040 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
P20040 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.27□□□□□ -1.57
P20040 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.27□□□□□ -1.57
P20040 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.27□□□□□ -1.57
P20040 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
P20040 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.27□□□□□ -1.57
P20040 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.27□□□□□ -1.57
P20040 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.27□□□□□ -1.57
P20040 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.27□□□□□ -1.57
P20040 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.27□□□□□ -1.57
P20040 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.27□□□□□ -1.57
P20040 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.27□□□□□ -1.57
P20040 Cma2-202ENSMUST00000228263 857 ntBASIC5.27□□□□□ -1.57
P20040 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
P20040 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
P20040 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
P20040 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.27□□□□□ -1.57
P20040 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
P20040 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
P20040 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
P20040 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.27□□□□□ -1.57
P20040 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.27□□□□□ -1.57
P20040 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
P20040 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
P20040 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
P20040 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
P20040 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.26□□□□□ -1.57
P20040 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
P20040 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.26□□□□□ -1.57
P20040 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
P20040 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.26□□□□□ -1.57
P20040 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.26□□□□□ -1.57
P20040 Gm14772-201ENSMUST00000116562 514 ntBASIC5.26□□□□□ -1.57
P20040 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.26□□□□□ -1.57
P20040 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
P20040 Gm12833-201ENSMUST00000136112 477 ntBASIC5.26□□□□□ -1.57
P20040 Mir1945-201ENSMUST00000157919 78 ntBASIC5.26□□□□□ -1.57
P20040 Gm25660-201ENSMUST00000158470 104 ntBASIC5.26□□□□□ -1.57
P20040 Gm26211-201ENSMUST00000158578 129 ntBASIC5.26□□□□□ -1.57
P20040 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.26□□□□□ -1.57
P20040 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.26□□□□□ -1.57
P20040 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
P20040 Gm10410-201ENSMUST00000180138 384 ntBASIC5.26□□□□□ -1.57
P20040 Gm26898-201ENSMUST00000181678 384 ntBASIC5.26□□□□□ -1.57
P20040 Gm21542-201ENSMUST00000182307 993 ntBASIC5.26□□□□□ -1.57
P20040 Gm26923-201ENSMUST00000182615 996 ntBASIC5.26□□□□□ -1.57
P20040 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.26□□□□□ -1.57
P20040 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.26□□□□□ -1.57
P20040 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Gm6074-201ENSMUST00000193340 451 ntBASIC5.26□□□□□ -1.57
P20040 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.26□□□□□ -1.57
P20040 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Gm44463-201ENSMUST00000198895 137 ntBASIC5.26□□□□□ -1.57
P20040 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.26□□□□□ -1.57
P20040 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.26□□□□□ -1.57
P20040 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.26□□□□□ -1.57
P20040 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.26□□□□□ -1.57
P20040 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.26□□□□□ -1.57
P20040 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.26□□□□□ -1.57
P20040 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
P20040 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
P20040 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.26□□□□□ -1.57
P20040 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.26□□□□□ -1.57
P20040 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.26□□□□□ -1.57
P20040 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.26□□□□□ -1.57
P20040 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
P20040 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms