Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm3549-201ENSMUST00000203873 794 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm18537-201ENSMUST00000205709 989 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm44539-201ENSMUST00000206010 238 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm44896-201ENSMUST00000206190 772 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Api5-ps-201ENSMUST00000206607 577 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm18600-201ENSMUST00000207205 505 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm9535-201ENSMUST00000218499 768 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm32899-201ENSMUST00000219694 207 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 AC133203.2-201ENSMUST00000226709 464 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm42725-201ENSMUST00000199296 4193 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm14896-201ENSMUST00000121311 1351 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm37717-201ENSMUST00000192647 3027 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb3O54879 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb3O54879 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb3O54879 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Hmgb3O54879 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm37551-201ENSMUST00000195556 2861 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm12985-201ENSMUST00000118376 183 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm5834-201ENSMUST00000126680 1026 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm23279-201ENSMUST00000157912 97 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Mir1981-201ENSMUST00000157934 82 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm24081-201ENSMUST00000175177 125 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm23631-201ENSMUST00000175291 123 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Mir5107-201ENSMUST00000175586 88 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm8609-201ENSMUST00000182967 998 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm28929-201ENSMUST00000185330 1193 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm18427-201ENSMUST00000195422 515 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm43779-201ENSMUST00000196691 829 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm9057-201ENSMUST00000198791 296 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm9419-201ENSMUST00000200672 567 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm18689-201ENSMUST00000203969 902 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm45127-201ENSMUST00000205984 1015 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm45626-201ENSMUST00000210093 361 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm4556-201ENSMUST00000217808 355 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 AC133598.4-201ENSMUST00000224577 454 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 AC154738.7-201ENSMUST00000228606 579 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb3O54879 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb3O54879 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm10705-201ENSMUST00000098980 461 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 AC107645.1-201ENSMUST00000228660 1810 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb3O54879 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC4.73□□□□□ -1.65
Hmgb3O54879 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb3O54879 AC151904.1-201ENSMUST00000219945 1498 ntBASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb3O54879 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb3O54879 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb3O54879 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hmgb3O54879 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.72□□□□□ -1.65
Hmgb3O54879 AC156031.1-201ENSMUST00000217288 2555 ntBASIC4.72□□□□□ -1.65
Hmgb3O54879 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb3O54879 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Hmgb3O54879 Gm26289-201ENSMUST00000104169 131 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms