Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Col4a6B1AVK5 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm23750-201ENSMUST00000104222 132 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm13259-201ENSMUST00000120792 456 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Mir6343-201ENSMUST00000183584 84 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm25564-201ENSMUST00000104604 132 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm25271-201ENSMUST00000157273 290 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm23965-201ENSMUST00000157969 142 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm25227-201ENSMUST00000158204 112 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm28429-201ENSMUST00000188521 363 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm2429-201ENSMUST00000194635 586 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm43712-201ENSMUST00000198020 291 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm3257-201ENSMUST00000207217 675 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Clec2j-201ENSMUST00000032517 515 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm7887-201ENSMUST00000056948 537 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col4a6B1AVK5 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.09□□□□□ -1.43
Col4a6B1AVK5 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm6134-201ENSMUST00000117265 171 ntBASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm9429-201ENSMUST00000117804 868 ntBASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.09□□□□□ -1.43
Col4a6B1AVK5 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms