Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a4A2AX52 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC5□□□□□ -1.61
Col6a4A2AX52 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a4A2AX52 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm44068-201ENSMUST00000204049 2128 ntBASIC4.99□□□□□ -1.61
Col6a4A2AX52 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.99□□□□□ -1.61
Col6a4A2AX52 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm11545-201ENSMUST00000146507 375 ntBASIC4.99□□□□□ -1.61
Col6a4A2AX52 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC4.99□□□□□ -1.61
Col6a4A2AX52 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm38670-201ENSMUST00000199248 77 ntBASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm44330-201ENSMUST00000200106 143 ntBASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.99□□□□□ -1.61
Col6a4A2AX52 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC4.99□□□□□ -1.61
Col6a4A2AX52 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a4A2AX52 Gm12287-201ENSMUST00000119770 707 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm7670-201ENSMUST00000121272 641 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm25439-201ENSMUST00000158280 131 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm18969-201ENSMUST00000189423 730 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm43516-201ENSMUST00000196891 322 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm42646-201ENSMUST00000202233 914 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm3148-201ENSMUST00000203594 612 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm45608-201ENSMUST00000210948 389 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 AC154527.1-201ENSMUST00000225809 242 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm23737-201ENSMUST00000082547 159 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 AC161884.1-201ENSMUST00000225436 2174 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm38077-201ENSMUST00000193657 3245 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm9894-201ENSMUST00000171257 2904 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm22272-201ENSMUST00000104039 134 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Mir7056-201ENSMUST00000183776 59 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm17981-201ENSMUST00000191109 739 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm17992-201ENSMUST00000207346 1072 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 AC163743.1-201ENSMUST00000224309 270 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Thoc7-209ENSMUST00000225325 765 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Mir133b-201ENSMUST00000083546 119 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 AC165080.3-201ENSMUST00000217162 3116 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 AC122346.1-201ENSMUST00000225266 3732 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC4.98□□□□□ -1.61
Col6a4A2AX52 Gm37249-201ENSMUST00000195185 2869 ntBASIC4.98□□□□□ -1.61
Col6a4A2AX52 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms