Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm38040-201ENSMUST00000193505 225 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm43078-201ENSMUST00000197222 168 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm7890-201ENSMUST00000204877 601 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm6056-201ENSMUST00000221253 488 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm8545-201ENSMUST00000120692 801 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm22106-201ENSMUST00000122544 127 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm3605-201ENSMUST00000185858 440 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm18553-201ENSMUST00000194152 634 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm34149-201ENSMUST00000203547 304 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Mir331-201ENSMUST00000083673 96 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.11□□□□□ -1.43
Scn1aA2APX8 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Scn1aA2APX8 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm13533-201ENSMUST00000121104 177 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Mir1970-201ENSMUST00000157839 104 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm23774-201ENSMUST00000158990 131 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm16139-201ENSMUST00000160015 420 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.1□□□□□ -1.43
Scn1aA2APX8 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms