Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CtcflA2APF3 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CtcflA2APF3 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.44□□□□□ -1.54
CtcflA2APF3 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CtcflA2APF3 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.44□□□□□ -1.54
CtcflA2APF3 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CtcflA2APF3 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CtcflA2APF3 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CtcflA2APF3 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CtcflA2APF3 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CtcflA2APF3 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Mir674-201ENSMUST00000102421 100 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm16007-201ENSMUST00000117837 286 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm13183-201ENSMUST00000118615 789 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm5843-201ENSMUST00000121631 476 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm14847-201ENSMUST00000121978 519 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm6264-201ENSMUST00000160802 624 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm22690-201ENSMUST00000175054 110 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Mir7222-201ENSMUST00000183740 75 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm43561-201ENSMUST00000199866 448 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm43459-201ENSMUST00000202093 331 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm44108-201ENSMUST00000203525 422 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm44279-201ENSMUST00000205154 472 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC5.43□□□□□ -1.54
CtcflA2APF3 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
CtcflA2APF3 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CtcflA2APF3 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CtcflA2APF3 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CtcflA2APF3 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.42□□□□□ -1.54
CtcflA2APF3 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm15801-201ENSMUST00000120920 522 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm8783-201ENSMUST00000159764 522 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm3344-201ENSMUST00000169610 603 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm20432-201ENSMUST00000173716 250 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Mir7212-201ENSMUST00000184098 61 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm37682-201ENSMUST00000191776 522 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Ighv1-29-201ENSMUST00000194116 342 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm17824-201ENSMUST00000197690 805 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm43063-201ENSMUST00000198198 1081 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.42□□□□□ -1.54
CtcflA2APF3 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm18997-201ENSMUST00000216353 822 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm8288-201ENSMUST00000223406 593 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 AC124489.3-201ENSMUST00000224037 278 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 AC154806.1-203ENSMUST00000227370 1032 ntBASIC5.42□□□□□ -1.54
CtcflA2APF3 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CtcflA2APF3 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CtcflA2APF3 Gm5582-201ENSMUST00000075251 522 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms