Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm14382-201ENSMUST00000117374 437 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm7189-201ENSMUST00000119811 429 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm22599-201ENSMUST00000157597 132 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm23617-201ENSMUST00000175410 95 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm7952-201ENSMUST00000180540 984 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm37784-201ENSMUST00000193233 189 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm37072-201ENSMUST00000194570 837 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm2040-201ENSMUST00000202979 289 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm5318-201ENSMUST00000205249 406 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm8290-201ENSMUST00000218202 477 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm18592-201ENSMUST00000221529 276 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 AC154646.1-201ENSMUST00000225011 1092 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdc40Q9DC48 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm23440-201ENSMUST00000104299 130 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm12643-201ENSMUST00000116078 374 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm9428-201ENSMUST00000127214 769 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm24179-201ENSMUST00000158925 127 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm16269-201ENSMUST00000160532 409 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm20778-201ENSMUST00000178524 627 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Mir7220-201ENSMUST00000183978 60 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm5306-201ENSMUST00000203325 757 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm18601-201ENSMUST00000220831 634 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm3800-201ENSMUST00000221086 554 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.59□□□□□ -1.51
Cdc40Q9DC48 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdc40Q9DC48 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.59□□□□□ -1.52
Cdc40Q9DC48 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Cdc40Q9DC48 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Cdc40Q9DC48 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Cdc40Q9DC48 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.59□□□□□ -1.52
Cdc40Q9DC48 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Cdc40Q9DC48 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.59□□□□□ -1.52
Cdc40Q9DC48 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Cdc40Q9DC48 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.58□□□□□ -1.52
Cdc40Q9DC48 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdc40Q9DC48 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 131.5 ms