Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm24773-201ENSMUST00000158513 99 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Adgrg4-206ENSMUST00000168724 531 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm17075-201ENSMUST00000171924 670 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm9457-201ENSMUST00000180176 372 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm29650-201ENSMUST00000188485 742 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm17967-201ENSMUST00000195319 647 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm44281-201ENSMUST00000203090 166 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 AC153968.2-201ENSMUST00000215579 1140 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm18628-201ENSMUST00000220584 475 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Olfr1153-201ENSMUST00000052300 957 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Gm44562-201ENSMUST00000207194 1347 ntBASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx56Q9D0R4 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm23979-201ENSMUST00000104071 128 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm25785-201ENSMUST00000104129 125 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm24989-201ENSMUST00000104461 88 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm13455-201ENSMUST00000118767 517 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm5793-201ENSMUST00000119393 630 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm14991-201ENSMUST00000119913 598 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm13357-201ENSMUST00000120528 537 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm3835-201ENSMUST00000120752 403 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm22276-201ENSMUST00000122469 129 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm23884-201ENSMUST00000122687 294 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm23674-201ENSMUST00000157473 131 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm21839-201ENSMUST00000179536 378 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm26509-201ENSMUST00000180947 948 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm27601-201ENSMUST00000184794 127 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm37517-201ENSMUST00000194004 1289 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm31532-201ENSMUST00000203555 767 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm19764-201ENSMUST00000203630 649 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm2996-201ENSMUST00000211398 537 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm5649-201ENSMUST00000217918 951 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Olfr687-201ENSMUST00000098154 938 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm18300-201ENSMUST00000192792 1406 ntBASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx56Q9D0R4 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.73□□□□□ -1.33
Ddx56Q9D0R4 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms