Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.72□□□□□ -1.17
Trim11Q99PQ2 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Trim11Q99PQ2 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim11Q99PQ2 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim11Q99PQ2 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Trim11Q99PQ2 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.71□□□□□ -1.17
Trim11Q99PQ2 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim11Q99PQ2 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Trim11Q99PQ2 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim11Q99PQ2 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
Trim11Q99PQ2 BC055308-201ENSMUST00000193380 2538 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm24519-201ENSMUST00000104507 132 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm14865-201ENSMUST00000117523 494 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm15766-201ENSMUST00000118025 813 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm15715-201ENSMUST00000118032 283 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm14007-201ENSMUST00000118288 210 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm12242-201ENSMUST00000118824 738 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm12988-201ENSMUST00000119054 478 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm4911-201ENSMUST00000119388 945 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm8577-201ENSMUST00000122420 986 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm24065-201ENSMUST00000157487 264 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm26025-201ENSMUST00000158655 271 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Mir5100-201ENSMUST00000174993 64 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm27160-201ENSMUST00000184837 199 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm43396-201ENSMUST00000197506 706 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm42804-201ENSMUST00000199701 178 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm44404-201ENSMUST00000203979 636 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm8556-201ENSMUST00000210437 664 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm6362-201ENSMUST00000217686 836 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 AC121844.1-201ENSMUST00000218706 137 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm32899-201ENSMUST00000219694 207 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 AW822073-201ENSMUST00000075305 555 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm25587-201ENSMUST00000082498 166 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim11Q99PQ2 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.71□□□□□ -1.18
Trim11Q99PQ2 Gm42536-201ENSMUST00000197562 1613 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim11Q99PQ2 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm18908-201ENSMUST00000207125 1483 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm12090-201ENSMUST00000118692 758 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm11798-201ENSMUST00000119150 421 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm13222-201ENSMUST00000119638 138 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm11653-201ENSMUST00000119992 1009 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm15242-201ENSMUST00000122459 283 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm24773-201ENSMUST00000158513 99 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC7.7□□□□□ -1.18
Trim11Q99PQ2 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm26652-202ENSMUST00000181672 475 ntBASIC7.7□□□□□ -1.18
Trim11Q99PQ2 Gm21392-201ENSMUST00000182950 972 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 464.2 ms