Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.01□□□□□ -1.45
Msh4Q99MT2 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6□□□□□ -1.45
Msh4Q99MT2 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
Msh4Q99MT2 Gm11242-201ENSMUST00000120103 2457 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Msh4Q99MT2 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Gm26146-201ENSMUST00000104478 185 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Msh4Q99MT2 Gm15078-201ENSMUST00000118371 782 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Msh4Q99MT2 Gm11925-201ENSMUST00000121375 535 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Gm11879-201ENSMUST00000121885 702 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Gm11349-201ENSMUST00000122209 1116 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6□□□□□ -1.45
Msh4Q99MT2 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6□□□□□ -1.45
Msh4Q99MT2 Gm25117-201ENSMUST00000157194 144 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Gm23954-201ENSMUST00000157213 353 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6□□□□□ -1.45
Msh4Q99MT2 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6□□□□□ -1.45
Msh4Q99MT2 Mir6244-201ENSMUST00000184156 117 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Gm37770-201ENSMUST00000192855 772 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Gm43233-201ENSMUST00000200491 616 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Gm43295-201ENSMUST00000201439 412 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Gm29815-201ENSMUST00000202418 178 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 BC049739-201ENSMUST00000202626 660 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6□□□□□ -1.45
Msh4Q99MT2 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC6□□□□□ -1.45
Msh4Q99MT2 AC104906.1-201ENSMUST00000218122 913 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6□□□□□ -1.45
Msh4Q99MT2 AC154633.1-201ENSMUST00000223276 449 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Msh4Q99MT2 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6□□□□□ -1.45
Msh4Q99MT2 Desi2-202ENSMUST00000069568 1193 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 n-R5s58-201ENSMUST00000093682 119 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Gm37435-201ENSMUST00000192078 3947 ntBASIC6□□□□□ -1.45
Msh4Q99MT2 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6□□□□□ -1.45
Msh4Q99MT2 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6□□□□□ -1.45
Msh4Q99MT2 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Msh4Q99MT2 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6□□□□□ -1.45
Msh4Q99MT2 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Msh4Q99MT2 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Msh4Q99MT2 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.99□□□□□ -1.45
Msh4Q99MT2 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.99□□□□□ -1.45
Msh4Q99MT2 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.99□□□□□ -1.45
Msh4Q99MT2 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Msh4Q99MT2 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Msh4Q99MT2 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Msh4Q99MT2 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Msh4Q99MT2 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Msh4Q99MT2 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Msh4Q99MT2 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Msh4Q99MT2 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.99□□□□□ -1.45
Msh4Q99MT2 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.99□□□□□ -1.45
Msh4Q99MT2 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.99□□□□□ -1.45
Msh4Q99MT2 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms