Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm14976-201ENSMUST00000117055 1394 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 AC123629.1-201ENSMUST00000225669 1364 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm13998-201ENSMUST00000120952 335 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Calr-ps-201ENSMUST00000121776 485 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm13363-201ENSMUST00000122008 522 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm24422-201ENSMUST00000157800 119 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm4904-201ENSMUST00000178243 1195 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Ighv8-3-201ENSMUST00000194985 295 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm44219-201ENSMUST00000203005 273 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm5735-201ENSMUST00000207053 167 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm45448-201ENSMUST00000211739 209 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Mir138-2-201ENSMUST00000083578 71 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm43588-201ENSMUST00000201862 2298 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm37482-201ENSMUST00000194899 2791 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm26300-201ENSMUST00000102282 94 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm12677-201ENSMUST00000118668 426 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm2986-201ENSMUST00000121603 382 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm13531-201ENSMUST00000121893 543 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm11609-201ENSMUST00000121926 793 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Mir1960-201ENSMUST00000157488 78 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm23757-201ENSMUST00000158353 100 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm18006-201ENSMUST00000177411 662 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 AC153505.2-201ENSMUST00000217741 277 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Gm31711-201ENSMUST00000220687 196 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 AC165092.4-201ENSMUST00000225025 679 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 CT009527.2-201ENSMUST00000225386 606 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 AC123665.3-201ENSMUST00000228735 1216 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 AC154806.5-205ENSMUST00000228828 411 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 AC163664.2-201ENSMUST00000228894 459 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Mir138-1-201ENSMUST00000083480 99 ntBASIC4.69□□□□□ -1.66
Nup35Q8R4R6 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms