Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Gm9671-201ENSMUST00000171502 547 ntBASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Gm43222-201ENSMUST00000199013 603 ntBASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Gm43906-201ENSMUST00000203194 906 ntBASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Gm8523-201ENSMUST00000211386 552 ntBASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Ccdc28aQ8CEI3 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ccdc28aQ8CEI3 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ccdc28aQ8CEI3 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.09□□□□□ -1.44
Ccdc28aQ8CEI3 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ccdc28aQ8CEI3 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.09□□□□□ -1.44
Ccdc28aQ8CEI3 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ccdc28aQ8CEI3 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm12077-201ENSMUST00000117049 364 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm11447-201ENSMUST00000118983 858 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm14679-201ENSMUST00000121536 722 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm5843-201ENSMUST00000121631 476 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm4152-201ENSMUST00000172675 259 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm7492-201ENSMUST00000201745 725 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm44134-202ENSMUST00000204777 545 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm44856-201ENSMUST00000206639 304 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm5735-201ENSMUST00000207053 167 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm45870-201ENSMUST00000211269 601 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc28aQ8CEI3 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Gm11270-201ENSMUST00000117685 471 ntBASIC6.07□□□□□ -1.44
Ccdc28aQ8CEI3 Gm14863-201ENSMUST00000119648 307 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 115.7 ms