Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mirt2-201ENSMUST00000175179 285 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Mir6940-201ENSMUST00000183447 70 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm28883-201ENSMUST00000189256 369 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37265-201ENSMUST00000191698 885 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37503-201ENSMUST00000192088 319 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Igkv4-77-201ENSMUST00000199410 352 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm6681-201ENSMUST00000205215 607 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm9652-201ENSMUST00000209345 163 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm3912-203ENSMUST00000211024 367 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 AC154361.1-201ENSMUST00000225694 745 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 AW046200-203ENSMUST00000211787 2479 ntBASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
Ccdc28bQ8CEG5 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm18908-201ENSMUST00000207125 1483 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm5454-201ENSMUST00000052030 1453 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm16394-201ENSMUST00000117289 675 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm14294-201ENSMUST00000119749 751 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm14267-201ENSMUST00000119751 496 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm11200-201ENSMUST00000121698 448 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm25281-201ENSMUST00000157270 104 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm25770-201ENSMUST00000158566 115 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm7418-201ENSMUST00000162120 801 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Mir5107-201ENSMUST00000175586 88 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm8609-201ENSMUST00000182967 998 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37774-201ENSMUST00000194401 245 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm4860-201ENSMUST00000200368 454 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm6702-201ENSMUST00000208496 471 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 AC165349.1-201ENSMUST00000217896 424 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm10205-201ENSMUST00000087431 234 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ccdc28bQ8CEG5 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28bQ8CEG5 Mir292-201ENSMUST00000104847 82 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms