Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm38362-201ENSMUST00000192999 2064 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.04□□□□□ -1.28
Nup88Q8CEC0 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Dnm3os-201ENSMUST00000139662 7928 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm7146-201ENSMUST00000116079 739 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm14510-201ENSMUST00000116165 1092 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm22714-201ENSMUST00000116894 78 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm11911-201ENSMUST00000117938 1023 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm7189-201ENSMUST00000119811 429 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm15194-201ENSMUST00000120453 434 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm11848-201ENSMUST00000121207 973 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm23030-201ENSMUST00000158004 273 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm28923-201ENSMUST00000187755 322 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm6631-201ENSMUST00000193699 559 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm37072-201ENSMUST00000194570 837 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm18290-201ENSMUST00000202900 844 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm45850-201ENSMUST00000212536 338 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Gm4510-201ENSMUST00000218265 427 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 CT030645.3-201ENSMUST00000225483 1022 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 AC129537.1-201ENSMUST00000226596 1228 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 AC166574.7-201ENSMUST00000228502 704 ntBASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Nup88Q8CEC0 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm9930-201ENSMUST00000066742 3151 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm22372-201ENSMUST00000104589 136 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm25782-201ENSMUST00000122526 289 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 n-R5s19-201ENSMUST00000122793 120 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Snora47-201ENSMUST00000157483 138 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm27468-201ENSMUST00000183577 106 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm27219-201ENSMUST00000184633 742 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Ighv1-44-201ENSMUST00000195597 352 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm43105-201ENSMUST00000202987 459 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm44108-201ENSMUST00000203525 422 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm44251-201ENSMUST00000204963 442 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 AC154527.1-201ENSMUST00000225809 242 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 AC118250.1-201ENSMUST00000228569 875 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Nup88Q8CEC0 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 AC156025.2-201ENSMUST00000225907 1533 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm15583-201ENSMUST00000116191 3510 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm37897-201ENSMUST00000192613 3561 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm37769-201ENSMUST00000193753 2369 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm26146-201ENSMUST00000104478 185 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm13870-201ENSMUST00000117214 1023 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm14695-201ENSMUST00000121721 282 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm22210-201ENSMUST00000158101 144 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm16164-201ENSMUST00000160078 468 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Gm20401-201ENSMUST00000173717 212 ntBASIC7.01□□□□□ -1.29
Nup88Q8CEC0 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms