Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm22642-201ENSMUST00000175352 252 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm28080-201ENSMUST00000188552 722 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm21524-201ENSMUST00000190499 696 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm21715-201ENSMUST00000191056 694 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm3544-201ENSMUST00000196129 305 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm44892-201ENSMUST00000208595 488 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm18255-201ENSMUST00000211316 765 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm44518-201ENSMUST00000208080 4370 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm43389-201ENSMUST00000196080 2595 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm12439-201ENSMUST00000117162 365 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm13176-201ENSMUST00000117910 477 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm13702-201ENSMUST00000118542 825 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm12369-201ENSMUST00000121343 942 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm37716-201ENSMUST00000193553 947 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm30646-201ENSMUST00000207662 180 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm18620-201ENSMUST00000222295 324 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm18247-201ENSMUST00000222937 601 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Gm43317-201ENSMUST00000197924 2544 ntBASIC6.69□□□□□ -1.34
Ccdc38Q8CDN8 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm12683-201ENSMUST00000117528 415 ntBASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm15715-201ENSMUST00000118032 283 ntBASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm9506-201ENSMUST00000118516 320 ntBASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm38237-201ENSMUST00000193366 376 ntBASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm42708-201ENSMUST00000196332 905 ntBASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.68□□□□□ -1.34
Ccdc38Q8CDN8 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms