Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm13818-201ENSMUST00000119441 511 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm12399-201ENSMUST00000121475 446 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm2986-201ENSMUST00000121603 382 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm26162-201ENSMUST00000157793 132 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm23082-201ENSMUST00000157852 133 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm26167-201ENSMUST00000158423 253 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm23777-201ENSMUST00000158994 259 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm37265-201ENSMUST00000191698 885 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm18984-201ENSMUST00000193998 1124 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm42452-201ENSMUST00000199749 617 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm19201-201ENSMUST00000210127 778 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 AC127302.1-201ENSMUST00000215973 1111 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm18103-201ENSMUST00000216621 779 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 AC158392.1-201ENSMUST00000223720 1069 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm26063-201ENSMUST00000083378 107 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sp140Q6NSQ5 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm25346-201ENSMUST00000104509 128 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm14382-201ENSMUST00000117374 437 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm14116-201ENSMUST00000117733 805 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm12442-201ENSMUST00000118372 338 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm13678-201ENSMUST00000118926 340 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm12929-201ENSMUST00000122406 370 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Mir1903-201ENSMUST00000122574 80 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm23467-201ENSMUST00000157127 159 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.28□□□□□ -1.4
Sp140Q6NSQ5 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms