Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm7927-201ENSMUST00000118818 880 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm20480-201ENSMUST00000173953 250 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm20453-201ENSMUST00000173968 226 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm24103-201ENSMUST00000174930 77 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm24081-201ENSMUST00000175177 125 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm10410-201ENSMUST00000180138 384 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm26898-201ENSMUST00000181678 384 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm28918-201ENSMUST00000188822 699 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm19087-201ENSMUST00000191430 946 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm18427-201ENSMUST00000195422 515 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm43354-201ENSMUST00000196862 346 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm18329-201ENSMUST00000215832 589 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim43aQ3TL54 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm9506-201ENSMUST00000118516 320 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm15181-201ENSMUST00000120142 177 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm18407-201ENSMUST00000192126 790 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm37581-201ENSMUST00000192371 988 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm43779-201ENSMUST00000196691 829 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm43762-201ENSMUST00000201521 295 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm18290-201ENSMUST00000202900 844 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm44053-201ENSMUST00000203364 929 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm18789-201ENSMUST00000216115 550 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm7808-201ENSMUST00000082002 387 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm26442-201ENSMUST00000082588 153 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm6990-201ENSMUST00000086830 348 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 AC159193.1-201ENSMUST00000222872 2517 ntBASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim43aQ3TL54 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.28□□□□□ -1.4
Trim43aQ3TL54 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim43aQ3TL54 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim43aQ3TL54 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.28□□□□□ -1.4
Trim43aQ3TL54 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim43aQ3TL54 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim43aQ3TL54 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.28□□□□□ -1.4
Trim43aQ3TL54 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms