Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Usp39Q3TIX9 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
Usp39Q3TIX9 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Usp39Q3TIX9 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Usp39Q3TIX9 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.21□□□□□ -1.41
Usp39Q3TIX9 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm13176-201ENSMUST00000117910 477 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm2288-201ENSMUST00000118560 638 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm14836-201ENSMUST00000118567 471 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm12465-201ENSMUST00000118591 300 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm14485-201ENSMUST00000119489 493 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm11472-201ENSMUST00000121305 556 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm5166-201ENSMUST00000121332 573 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm15164-201ENSMUST00000122203 271 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm25271-201ENSMUST00000157273 290 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm9529-201ENSMUST00000177598 579 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm28846-201ENSMUST00000189161 368 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm18849-201ENSMUST00000189861 560 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm20926-201ENSMUST00000194457 696 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm6321-201ENSMUST00000194460 1090 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm44265-201ENSMUST00000203631 465 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm18387-201ENSMUST00000220333 702 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 AC192616.1-201ENSMUST00000221922 132 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 AC123534.1-201ENSMUST00000224060 656 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 AC168880.1-201ENSMUST00000225113 707 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm22351-201ENSMUST00000083925 107 ntBASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp39Q3TIX9 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Gm44742-201ENSMUST00000207190 1412 ntBASIC6.2□□□□□ -1.42
Usp39Q3TIX9 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.2□□□□□ -1.42
Usp39Q3TIX9 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms